Caulobacter vibrioides NA1000: CCNA_02418
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Entry
CCNA_02418 CDS
T00841
Name
(RefSeq) uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ccs
Caulobacter vibrioides NA1000
Pathway
ccs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CCNA_02418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccs03400
]
CCNA_02418
Enzymes [BR:
ccs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CCNA_02418
DNA repair and recombination proteins [BR:
ccs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CCNA_02418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-GeneID:
7331650
NCBI-ProteinID:
YP_002517791
UniProt:
A0A0H3CC18
LinkDB
All DBs
Position
2561765..2563204
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AA seq
479 aa
AA seq
DB search
MQVVRLASEVDFAGWRRAARVLRAEGARPESLVWTVERELFDNDEPVTDAATTFVVPAAF
MEMAQQVVLNRSLDRFALLYRILWRLEREPRLIENPADQDMARARDMAKAVSRAAHKMKA
FVRFRRVEDAAKETYAAWFEPAHRVTEATAPFFARRFSNMNWTILTPDVCVAWNGERLWV
SEGADPADAPSEDAQEALWRTYYASIFNPARLNPRQMRQEMPKRYWRNLPEAALIPGLIE
AAQDRAAAMVTTPPRPPSERVLKAAQRHARDAPYNAGAPTTLDAVRAGVSVCRRCDLWRE
ATQGVPGDGAPSAPLMFVGEQPGDQEDLAGSPLVGPAGQIFDRALAEVSVRREQTYVTNA
VKHFKHELNGKRRLHKTPTQGEVSACRWWLDAERRLVRPTVIVMLGATAAFGVMGRPTPV
RETRGRPLPLPDGVQGLVTFHPSYLLRLPDAAARENAYRSFVDDLRLAGRLAGLAATSP
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtggttcgcctcgcctcagaagtcgatttcgccggctggcgaagggccgcccgg
gtcctgcgggccgagggcgcgcgccccgaatcgctcgtctggacggtggagcgcgagctc
ttcgacaatgatgagccggtgacggacgcggcaacgacgttcgtcgttccagccgccttc
atggaaatggctcaacaggtcgtgctgaaccggtcgctggatcggttcgccctgctctac
cgcattctctggcgactggagcgcgagccgcgattgatcgagaaccccgccgatcaggac
atggcgcgcgcccgcgacatggccaaggccgtcagccgcgccgcccacaagatgaaggcg
ttcgtccgctttcgccgggtggaggacgcagccaaggaaacctacgcggcctggttcgaa
cccgcccaccgggtgaccgaggctacggcgcccttcttcgcgcgccgcttctccaacatg
aactggaccatcctgacacccgacgtctgcgtggcctggaacggggagcggctatgggtt
tcggagggcgcggatcccgccgacgcgccgtccgaagacgcccaggaagcgctctggcga
acctactatgcgtcgatcttcaatccggcccgtctcaacccacgccagatgcgccaggaa
atgcccaagcggtactggcgtaacctcccagaggccgcgctcattccaggccttatcgaa
gccgcccaggatcgcgcggccgccatggtcacgacgccgccgcgtcccccgtcagaacgc
gttctgaaggccgcgcagcgccatgctcgggatgcgccatacaacgctggtgcgccgacc
actctggacgccgtgcgcgccggcgtcagcgtctgtcggcgctgcgatctgtggcgggag
gcgactcagggcgttccgggtgacggggcgcccagcgcgcccttgatgtttgtcggcgag
cagcccggcgatcaggaggatctcgcgggcagccccttggtgggtcctgcaggacagata
ttcgaccgagcgctcgccgaggtgagtgtgcggcgcgagcagacctacgtcacgaacgcg
gtgaagcacttcaagcatgaactcaacgggaaacgccgcctgcacaagacccccacccag
ggcgaggtgagcgcgtgtcgatggtggctggacgcggagcggcggttggtcaggccgacg
gtcatcgtgatgctgggcgcgaccgccgccttcggcgtcatggggcggccaacgcctgtc
cgtgaaaccagaggacgcccactgcccttgccggacggggtccaggggctcgtgaccttt
catccgtcgtacctgctgcgcctgccggacgctgcggcgagagagaacgcctaccgctct
ttcgtggacgatcttcgtctggcgggccggctggccggcctggccgcgacatccccttga
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