Caulobacter vibrioides NA1000: CCNA_03161
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Entry
CCNA_03161 CDS
T00841
Symbol
xylR
Name
(RefSeq) transcriptional regulator xylR
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ccs
Caulobacter vibrioides NA1000
Brite
KEGG Orthology (KO) [BR:
ccs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccs03000
]
CCNA_03161 (xylR)
Transcription factors [BR:
ccs03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CCNA_03161 (xylR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_3
HTH_38
HTH_23
HTH_31
HTH_24
TnsD
TetR_N
HTH_AraC
HTH_Crp_2
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
7330999
NCBI-ProteinID:
YP_002518534
UniProt:
A0A0H3CCI6
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All DBs
Position
3316700..3317755
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AA seq
351 aa
AA seq
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MNQPVERQRRRTTQSATIRDVAARAGVSPMTVSRVINRESTVKEETRQLVEKAIADLNYA
PNPAARSLAGSAPFRIGLLYDNPSTGYLSEFLVGALDESSRTGAQIVIEKCAEPELARAT
LARLLKTGVDGLILPPPLCESPEVLAEIRAAGAAAVAVAPGTASADMATIRIDNEAAAFE
LTQHLIGLGHKRFGFIKGHPNQTVSQQRLDGFMTALKAAGIPQENIRVEQGYFTYRSGLE
AAERLLAAEPRPTAIFAANDDMAAATAGVAHRLGLDVPGDVSIVGFDDTSIADNIWPPLT
TVHQPIAAMARAAVDLVLEEIRRHRDGGGEPRQLMHPHTLIVRDSSGPAGV
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagcctgtcgagcgccagcgtcgccggacgacccagagcgccacgatccgcgac
gtggcggcccgggcgggggtctcgccgatgacggtgtcgcgggtcatcaatcgcgagagc
acggtcaaggaagagacccgccagctggtcgagaaggccatcgccgacctcaactacgcg
cccaatcccgccgcccgcagcctggccggcagcgcgccgttccgcatcggcctgctctac
gacaacccctcgacgggctacctgtcggagttcctggtcggggcgctggacgaaagcagc
cgcaccggggcccagatcgtcatcgaaaagtgcgccgagccggagctggcccgcgccacc
ctggcccgcctgctgaagaccggcgtcgatggcctgatcctgccgccgccactgtgcgag
tctcccgaggtgctggccgagatccgcgcggcgggcgccgccgccgtggccgtggcgccc
ggcacggccagcgccgacatggccaccatccgcatcgacaacgaggcggccgccttcgag
ctgacccagcacctgatcggccttggccacaagcgcttcggcttcatcaagggccatccg
aaccagacggtcagccagcagcgcctggacggcttcatgaccgccctgaaggccgccgga
attccgcaggaaaacatccgggtcgagcagggctatttcacctatcgctcgggcctggag
gcggccgagcgcctgctggccgccgagccgcgtcccaccgcgatctttgcggccaatgac
gacatggccgccgccacggcgggcgtggcccatcgcctgggcctggacgtgccgggcgac
gtctcgatcgtcggcttcgacgacacctcgatcgccgacaacatctggccgcccctgacc
acggtccatcagccgatcgcggccatggcccgcgcggccgtcgacctggtcctggaagaa
atccgccgccatcgcgacggcggcggcgaaccgcgccagctgatgcacccgcataccctg
atcgtgcgggattccagcgggccggcgggggtctag
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integrated database retrieval system