| Entry |
|
|---|
| Name |
(RefSeq) ATP-dependent DNA helicase recQ
|
|---|
| KO |
|
|---|
| Organism |
ccs Caulobacter vibrioides NA1000
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:ccs00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCNA_03578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ccs03019]
CCNA_03578
03400 DNA repair and recombination proteins [BR:ccs03400]
CCNA_03578
Enzymes [BR:ccs01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCNA_03578
Messenger RNA biogenesis [BR:ccs03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CCNA_03578
DNA repair and recombination proteins [BR:ccs03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CCNA_03578
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
3735005..3736852
|
|---|
| AA seq |
615 aa
MYVPPESPELDRARDVLRRTFGHADFRGLQAGVIHELLTGHSAMAVLPTGGGKSLCYQIP
SLIRPGLGLVISPLIALMADQVQGLRQAGVAAERLDSNISMDERSDIWRRIDAGEVDLLY
LSPEGLMQPWMLDRLSRTPLALIAVDEAHCVSQWGHDFRPEYRMLGRLAELFPDAPRLAV
TATADARTRDDIRAELRLQGAAEFVDSFARPELALSAERKRGKGHDRVVELVLERPGRSG
VIYAGSRDGTEKLAERLNAEGVPALAYHAGLDKAVRARRLEDFLEADAAVMVATIAFGMG
VDKPDVRYVIHADPPAAIEAYWQEVGRAGRDGQPAEGITLYGSADMAWAARRIETREAPD
EVKQVQSRKLRQFYAMLEGVTCRAAAVRRYFGEEGVGHCGVCDICVSPPTGIDATQAAQK
ALSAVHRLGGRLGRGRVIEHLMGKTKDVTPQEAQLPTFGIGREFSQPTWRDLFDTLIFEG
LLREDPNDGRPLIGLGDVEGVRQVYRNERKVALRQTTDAPDSGGRAGGGMRKRREGRALT
IPAENQLLFEALRSWRKEQAQLQHVPPYVIFHDATLAEIAAARPATLAALGKAGGVGQGK
LDRYGEAVLKVVREN |
|---|
| NT seq |
1848 nt +upstreamnt +downstreamnt
gtgtacgtccctcccgaatccccagagctcgaccgcgcgcgcgacgtcctgcgccgcaca
tttggtcacgccgacttccggggtctgcaggccggggtcatccacgagctgctgaccggc
cacagcgccatggcggtgctgcccaccggtggcggcaagagcctgtgctaccagatcccg
tcgctgatccggccgggcctgggtctggtcatctcaccgctgatcgccctgatggccgac
caggtgcagggcctgcgccaggccggcgtcgccgccgagcggctggacagcaacatctcg
atggacgagcgctcggacatctggcggcgcatcgacgccggcgaggtggatctgctgtat
ctgtcgcccgagggcctgatgcagccctggatgctggaccggctctcgcgcacgccgctg
gccctgatcgccgtggacgaagcccactgtgtcagccagtggggccacgacttccgtcct
gaataccggatgctgggtcggctggccgagctgttccccgacgcgccgcgcctggccgtc
accgccaccgccgacgcccgcacccgtgacgacatccgcgccgagctgcgcctgcagggc
gcggccgagttcgtcgacagcttcgcgcgtccggagctggcgctcagcgcggagcgcaag
cgcggcaagggtcacgaccgggtggtggagctggttctggaacgccccggccgctctggc
gtcatctatgccggctcgcgcgacggcaccgagaagctggccgaacggctgaacgccgag
ggcgtcccggccctggcctatcacgccggtctcgacaaggccgttcgcgcccgccggctg
gaagacttcctcgaggccgacgccgcggtgatggtcgccacgatcgcgttcggcatgggc
gtcgacaagcccgacgtgcgctatgtgatccacgccgatccgccggccgccatcgaggcc
tattggcaggaagtcggccgcgccgggcgcgacggacagccggccgagggcatcaccctc
tatggctcggccgacatggcctgggctgcgcgccggatcgagacccgcgaggcgcccgat
gaggtcaagcaggtgcagtcgcgcaagctgcgccagttctacgccatgctggagggcgtc
acctgccgcgccgccgccgtccgccgctatttcggcgaagagggcgtcggccactgcggg
gtctgcgacatctgcgtctcgccgcccaccgggatcgacgccacgcaagcggctcagaag
gcgctgtcggccgtccaccggctgggcgggcgtcttggtcgcggccgcgtgatcgagcac
ctgatgggcaagaccaaggacgtcacgccccaggaggcgcaactgccgaccttcggcatc
ggccgcgagttcagccagccgacctggcgcgatctcttcgacaccctgatcttcgagggc
ctgctgcgcgaggatcccaatgacgggcgaccgctgatcggcctgggcgatgtcgagggc
gtgcggcaggtctatcgcaacgagcgcaaggtcgcgctgcgccagaccaccgacgcgccc
gacagcggcggccgcgcggggggcggaatgcgcaagcgccgcgagggccgcgccctgacc
atcccggccgaaaaccagctcctgttcgaggccctgcgctcctggcgcaaggagcaggcc
cagctgcagcacgtgccgccctatgtgatcttccacgacgccaccctggccgagatcgcg
gccgcgcgccccgccaccctggcggcgctgggcaaggccggcggcgtgggccaaggcaag
ctcgatcgctatggcgaggcggtcttgaaagtggttcgcgagaactaa |
|---|
