Caulobacter vibrioides NA1000: CCNA_03651
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Entry
CCNA_03651 CDS
T00841
Name
(RefSeq) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ccs
Caulobacter vibrioides NA1000
Brite
KEGG Orthology (KO) [BR:
ccs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccs03400
]
CCNA_03651
Enzymes [BR:
ccs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCNA_03651
DNA repair and recombination proteins [BR:
ccs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CCNA_03651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-GeneID:
7329742
NCBI-ProteinID:
YP_002519024
UniProt:
A0A0H3CC48
LinkDB
All DBs
Position
3808728..3811718
Genome browser
AA seq
996 aa
AA seq
DB search
MSGSAPFFDREGPRWYSIPAHRPFVDDLARGLLNTLEPLGPEALPRATVLTPTRRGARAL
ADAFLSVGGGRALLLPQIRPLGDLDEGEPPFEPGELSLTLPPAISSRRRRFELARLVTDH
GDKLSFKPGPVQALELAKALSEFLDSCQIEEVNFDDKLDGLAEGDLAQHWQVSARFLRSV
LRAWSTRLDTLGLIDVSERRVRLLRALEAQWRDNPPTEVLVAAGSTGTAPATADLLRVIA
AAPKGAVVLPGLDEDLADTAWAKIKGSQGEQHPQGAMKRLLDRAGVSRAEVRAWVPEVDS
RGRWRRRIVNEALRPAEATADWLSQIAALRAEAPGLDPVAEGLTGFSVIAARAEEEAAGA
CALLLREALEDPVRTAALVTPDQTLARRVMTRLQRWGVIPDSSAGAPLAAAGSAILALHL
ARLVEEPLNPVRLLAFAKHPLVLGEDEVPAAALLERKGLRGAAPGSADVLRARLREAPDA
LALAERVLVAVNHAAAPYGDGALAAPARAAQALVEALESLIAPDRLWAGNAGECLGALMA
ALIQDGEPLPDASPQAFGDILDRLVNEETVRVGGATHPRLRILGAIEARLVRADRLVLAG
LEEGVWPQGAPIDPFLSRPMRQRLGLPPPERRIGLTAHDFAQAASAPDVVLVHCERRGGA
PAVESRWLWRLKTLAAGAGLELPRRDDVTDWVSALDAPGPYAPIGRPAPKPPVEDRPRKM
AVTRVEALTRDPYAVWARDILKLYPLERPDEPVEARARGTAIHAAFERFAELYPDAVPAE
AASAFEKLYVDALVSAGMPPTALAREKALAREAAAWVADWERQRRTQVRRIVVEAEGKLE
LVINGRPFTLTAKADRIEPTPDGTAHILDYKTGAAPSQKQVDTGFSPQLTLTAAILMNGG
FPDLGRPAPGDLTYVRVTGRRPAGEEQVRAKGDGESEDAARKALEGLSSLIARYDDPDEP
YRSRVAPQFVKEHPGDYAHLARVFEWSTSGDDGEGE
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggtccgcgccgttcttcgaccgtgaagggccgcgctggtattcgatcccggcg
caccgcccgttcgtcgacgatctggcgcggggcctgttgaacacgctggagccgctgggt
cccgaggccctgccgcgcgccacggtgctgaccccgacccgccggggcgcgcgcgctcta
gccgacgccttcctgtcggtcggcggcggtcgggcgctgctgctgccgcaaatccggccg
ctgggcgatctggacgaaggcgagccgccgttcgagccgggggagctgtccctgactctg
ccgccggcgatctcgtcgcggcggcggcggttcgaactggcgaggctggtgaccgaccac
ggcgacaagctgtcgttcaagcccggccccgttcaggcgctggaactggccaaggcgctc
agcgagtttctcgacagctgccagatcgaggaagtgaatttcgacgacaagctggacggc
ctggcggagggcgatctggcccagcactggcaggtctcggcccggttcctgcggtccgtg
ctgcgggcctggtccacgcggctggacactctgggcctgatcgacgtctccgaacgtcgc
gtccgactgctacgcgctcttgaggcgcagtggcgcgacaacccaccgaccgaggtgctg
gtcgccgccggttcgaccggcaccgcgccagcgaccgccgacctgctacgggtcatcgcc
gccgcgcccaagggggccgtggtgctgccgggtctcgacgaggatctcgcggacaccgcc
tgggccaagatcaagggctcccagggcgagcagcatccgcagggggcgatgaagcgcctg
ctggaccgcgccggcgtctcgcgcgccgaggtccgcgcctgggttcccgaggtcgacagc
cgcggccgctggcgtcgtcgcatcgtcaacgaggcgctgcgtcccgccgaagccaccgcc
gactggctgagccagatcgccgccctgcgcgccgaggctcccggcctcgaccccgtcgcc
gagggcctgacgggcttctcggtcatcgccgcccgtgccgaggaagaggccgccggcgcc
tgcgccctcctgctgcgcgaagctctggaagatccggtgcgtacggccgccctcgtcacc
ccggaccagaccctggcgcgtcgggtcatgacccgcctgcagcggtggggcgtcatcccc
gacagctcggccggcgcgccgctggccgccgccgggtcggcgatcctggctttgcacctg
gccaggctggtcgaggagccgctcaatcccgtccgcctgctggccttcgccaagcacccg
ctcgtcttaggcgaggatgaagtgcccgccgccgccctgctggagcgtaagggcctgcgc
ggtgccgcgccgggctcggccgacgtcctccgcgcccgcctccgcgaggcaccggacgcc
ctggccctggccgaacgcgtgctggtcgccgtgaaccatgccgccgcgccctatggcgac
ggcgccctcgccgcccccgcccgcgcggcccaggctctggtcgaggcgctggagtcactg
atcgcgccagatcgtctttgggcgggtaacgccggggagtgcctgggggcgctgatggcc
gccctgatccaggacggcgagcccctgcccgacgcctcgccccaggccttcggcgacatt
ctcgaccgcctcgtcaacgaagagaccgtccgtgtgggcggcgcgacccatccgcgtctg
cgcatcctcggcgcgatcgaggcgcgtctggtgcgcgccgaccggctggtgctggcgggc
ctggaggaaggcgtctggccgcaaggtgcgccgatcgatccgttcctgtcgcggcccatg
cgccagcgcctgggcctgccgccgcccgagcgccggatcggcctgaccgcccacgacttc
gcccaggccgccagcgcgccggacgtggttctggtccattgcgagcggcgtggcggcgcg
ccggccgtcgagtcccgctggctgtggcgtctgaagaccctggcggccggcgcgggcctc
gaattgccgcgtcgcgatgatgtgaccgactgggtcagcgctctggacgcgccggggccc
tacgcgcccatcggccgccccgcgcccaagccgcccgtcgaggatcggccgcgcaagatg
gcggtgacacgcgtcgaggccctgacccgcgatccctacgccgtctgggcgcgggatatc
ctgaagctctatccgctggagcgtcccgacgagccggtcgaggcccgggcgcgcggcacc
gccatccacgccgcctttgaaaggttcgccgagctctatcccgacgccgtgccggctgaa
gcggcctcagccttcgagaagctctatgtcgacgccctggtcagcgccggcatgccgccc
accgccctggcccgcgagaaagccctggcccgcgaggccgccgcctgggtcgccgactgg
gagcgccagcgccgcacccaggtgcgccgcatcgtcgtcgaggccgagggcaagctggag
ctcgtcatcaacggccgccccttcaccctgaccgccaaggccgaccgtatcgagccgaca
ccggacggaaccgcccatatcctcgactacaagaccggcgccgcgccgtcgcagaagcag
gtcgacaccggcttctcgccacagttgaccctgacggcggcgatcctgatgaacggcggc
ttcccggacctcggccgtcccgcgcccggcgacctgacctatgtccgcgtcacggggaga
cgccccgccggcgaggagcaggtccgggccaagggcgacggcgaaagcgaggacgccgcg
cgcaaggctctggaaggcctgtcgtccctgatcgcccgttacgatgacccggacgagccc
taccgctcgcgggtcgcgccgcagttcgtcaaggagcaccccggcgactacgcgcatctg
gcgcgggtgttcgaatggtcgaccagcggcgatgacggagagggcgaatga
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