Caulobacter vibrioides NA1000: CCNA_03701
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Entry
CCNA_03701 CDS
T00841
Symbol
ihfB
Name
(RefSeq) integration host factor beta-subunit
KO
K05788
integration host factor subunit beta
Organism
ccs
Caulobacter vibrioides NA1000
Brite
KEGG Orthology (KO) [BR:
ccs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccs03032
]
CCNA_03701 (ihfB)
03036 Chromosome and associated proteins [BR:
ccs03036
]
CCNA_03701 (ihfB)
03400 DNA repair and recombination proteins [BR:
ccs03400
]
CCNA_03701 (ihfB)
DNA replication proteins [BR:
ccs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CCNA_03701 (ihfB)
Chromosome and associated proteins [BR:
ccs03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CCNA_03701 (ihfB)
DNA repair and recombination proteins [BR:
ccs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CCNA_03701 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Lmo2446-like_N
HU-DNA_bdg
Motif
Other DBs
NCBI-GeneID:
7331895
NCBI-ProteinID:
YP_002519074
UniProt:
B8H6A5
LinkDB
All DBs
Position
complement(3869198..3869488)
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AA seq
96 aa
AA seq
DB search
MIKSELIARLANENPHLTQKDVERVVGVILERMIGALEDGGRVELRGFGALSVRSRPART
GRNPRTGEAVDVRAKHVPFFKSGKELRARLNADGDE
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagtctgaactcatcgccaggctcgcgaatgaaaatccgcacctgacgcagaag
gacgtcgagcgcgtcgtcggcgtgatcctcgaacggatgatcggcgccctggaagatggc
ggtcgtgtcgagcttcggggctttggcgccctgtcggtccgctcgcgccccgcgcgcacg
ggccgcaatccccgcaccggcgaggccgtggatgttcgcgccaagcacgtgccgttcttc
aagagcggcaaggagctgcgcgcccgcctgaacgccgacggcgacgaatag
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