Caulobacter vibrioides NA1000: CCNA_03713
Help
Entry
CCNA_03713 CDS
T00841
Name
(RefSeq) RNA polymerase sigma-54 factor rpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
ccs
Caulobacter vibrioides NA1000
Pathway
ccs02020
Two-component system
ccs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ccs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CCNA_03713
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CCNA_03713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccs03021
]
CCNA_03713
Transcription machinery [BR:
ccs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CCNA_03713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
HTH_3
PP_kinase_C
Motif
Other DBs
NCBI-GeneID:
7331908
NCBI-ProteinID:
YP_002519086
UniProt:
A0A0H3CCA2
LinkDB
All DBs
Position
complement(3878345..3879838)
Genome browser
AA seq
497 aa
AA seq
DB search
MALSHRLELRQGQGLVITPQLQQAIKLLQLSNIELDAFVEAELERNPLLQRDEGDHEPAV
EVEAERDASLTQVDAVADTTAGRELDTPVDDVSPGERATGEGTDAEHAGGQIDWSRAGGG
GSFESDEGYERALTDSPTLAAHLRTQLVQAALSPAHNAIAEILIDAVDEGGYLRLDIVEL
ADRLGCALALVEETLSVLQGFEPVGVFARDVRECLALQLKDLNRYDPAMAAMLDHLELLA
KRDMAGLRRICGVDDEDLREMIGEIRSLNPRPGAAYHSEPAETLVPDVMVREGLGGMWHV
ELNTDTLPRVLVDQRYHARVSKGARSDQEKTFVADCMASANWLVKSLDQRAKTILKVASE
IVRQQDGFLAFGVEHLRPLNLKTVADAIGMHESTVSRVTSNKYIATPRGVFELKFFFTSA
IQSSEGGEAHSAASVRHKIKGLVDAEKCEADVHSDDRIVEILKAAGVDIARRTVAKYREA
MRIPSSVERRRLMKEAV
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
ttggcgctcagccaccgactagagctccggcagggccagggcctcgtcatcaccccgcaa
ctgcagcaggccatcaagctgctgcagctgtcgaacatcgagctcgacgccttcgtcgag
gccgagctggagcgcaatccgctcctgcaacgcgatgagggcgatcacgagccggccgtt
gaggtcgaggccgagcgggacgccagcctgacccaggtcgacgcggtggccgatacgacg
gccgggcgcgagctggacacgcccgtcgacgacgtctcccccggcgagcgcgccaccggc
gaggggacggacgccgagcacgccggcgggcagatcgactggtcgcgcgcgggcggcggc
ggctcgttcgagagcgatgagggttacgagcgcgcgctgaccgacagcccgaccctggcc
gcgcacctgcgaacccagctggtgcaagccgcgctctcaccggcccacaacgccatcgcc
gagatcctgatcgacgcggttgatgaaggcggctacctgcgcctcgacatcgtcgagctt
gccgatcgtctgggctgcgccctcgcattggtcgaagagaccctgtcggtgctgcagggc
ttcgagcctgtcggcgtcttcgcccgcgacgtgcgcgagtgcctggcgctgcagctcaag
gacctgaaccgctacgacccggccatggccgccatgctcgatcacctcgagctcttggcc
aagcgggatatggcgggcctgcgccggatctgcggcgtcgacgacgaagatctgcgcgag
atgatcggcgagatccggtcgctgaatccgcgtccgggcgcggcctatcacagcgagccg
gccgagaccctggtgcccgacgtcatggtccgcgagggtcttggcggcatgtggcacgtg
gagctgaacaccgacaccctgccgcgcgtgctggtcgaccagcgctaccacgcccgcgtc
tccaagggcgcgcgcagcgaccaggaaaagaccttcgtcgccgactgcatggcctcagcc
aactggctggtgaagagcctggaccagcgggccaagaccatcctgaaggtcgccagcgag
atcgtgcgccagcaggacggcttcctggccttcggcgtcgagcacctgcgaccgctgaac
ttgaagacggtcgccgacgccatcggcatgcacgagagcacggtcagccgcgtgacctcg
aacaagtacatcgccaccccccgcggcgtgttcgagctgaagttcttcttcacctcggcc
atccagtcgtccgaaggcggcgaggcccactcggccgccagcgtccggcacaagatcaag
gggctggtcgacgccgagaaatgcgaggccgacgtccattccgacgatcgcatcgtagag
attctcaaggcggccggggtcgacatcgcccgtcggaccgtggccaagtatcgagaggcc
atgcggatcccctcgtcagtggagcgtcgccggctgatgaaggaagcggtctga
DBGET
integrated database retrieval system
