Caulobacter vibrioides NA1000: CCNA_03717
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Entry
CCNA_03717 CDS
T00841
Name
(RefSeq) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ccs
Caulobacter vibrioides NA1000
Brite
KEGG Orthology (KO) [BR:
ccs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccs03016
]
CCNA_03717
Enzymes [BR:
ccs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CCNA_03717
Transfer RNA biogenesis [BR:
ccs03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CCNA_03717
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
7331912
NCBI-ProteinID:
YP_002519090
UniProt:
A0A0H3CFR3
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All DBs
Position
complement(3881992..3882609)
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AA seq
205 aa
AA seq
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MANFVHEGDLPDGVFADAEIIAIDSETMGLRLRRDPLCVVQLSAGDGDAHVVRLSRPDYD
CPNLKALLTNPKVLKLFHFGRFDIAMFELHLGVVTAPVYCTKIASKLARTYTDRHGLKDV
TRELLGVELSKVQQSSDWGAPSLSVDQVAYAASDVLHLHGLRLKLNAMLEREGRMALAQH
AFDYLPHRASLDLAGWEEMDIFAHS
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
ttggccaatttcgttcacgagggcgatctgcccgacggcgtcttcgcggacgcggagatc
atcgcgattgattcggagaccatgggcctgcgcttgcgccgcgatccgctgtgcgtggtt
cagctttcggccggcgacggcgacgcccatgtggtgcggctcagccggcctgactacgac
tgcccgaatctgaaggcgctgctgacgaatccgaaggtcctgaagctttttcacttcggg
cgctttgatatcgccatgttcgagctccatctgggggtggtgaccgcgcccgtctattgc
accaagatcgccagcaagctggctcgcacctataccgaccgccacggcctcaaggacgtg
acgcgcgagttgctgggcgtcgaactgtcgaaggtgcagcagtcttcggactggggcgcg
ccgtcgctcagcgtcgatcaggtggcctacgccgcctcggacgtgctgcatctacatggc
ctgcgcctcaagctgaacgccatgctcgagcgcgagggccgcatggcgctggcgcaacac
gcttttgactatctcccccatcgcgcctcgctggatctggccggttgggaggagatggac
atcttcgcccacagctaa
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