Caulobacter vibrioides NA1000: CCNA_03872
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Entry
CCNA_03872 CDS
T00841
Symbol
trmE
Name
(RefSeq) tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ccs
Caulobacter vibrioides NA1000
Brite
KEGG Orthology (KO) [BR:
ccs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccs03016
]
CCNA_03872 (trmE)
Transfer RNA biogenesis [BR:
ccs03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
CCNA_03872 (trmE)
Prokaryotic type
Methyltransferases
CCNA_03872 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
GCV_T
cobW
AAA_28
Dynamin_N
AAA_18
ABC_tran
Arf
Motif
Other DBs
NCBI-GeneID:
7332720
NCBI-ProteinID:
YP_002519245
UniProt:
B8GW34
LinkDB
All DBs
Position
complement(4034962..4036332)
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AA seq
456 aa
AA seq
DB search
MARASSATDRMTDTIFALATAAGRSAVAVVRVSGPRSSEIAAALCGRLPSPRLASVRTLK
HNGVALDAALVLRFEKPASYTGEDSVEFHVHGGRAVVEALLAALSELGARLAEAGEFTRR
AFENGKLDLAQAEGVADLIDAETEAQRRQALGQVGGALSQRYDRWRDLLVQALAMLEAAV
DFPDEDLPEEVAERARPGLRQLSAELNAALADVSRGRRVRDGFRIALIGAPNAGKSTLLN
GLAERDAAIVTDVAGTTRDVIEVPLVLGGYKVLVADTAGIRETADVIEAEGVRRAKAWAE
AADLRLWVVDGFHVKQADARPEAIRVGDWLILNKTDIADADASAHVAERWAGEGLTVLHI
AGTSAEGPEALRAALASHVADALSGAEFPAATRLRHAERLSEARSYLERALSDVGLEVEL
AAEDVRLAARALERISGRIDPEDVLGRVFSTFCIGK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcgggcgtcaagcgcgactgatcgtatgacggacacgatcttcgccctggcgacg
gcggccggccgctcggccgttgcggtggtgcgcgtatccggtccccggtcgtcggagatc
gccgctgcgctttgcggtcgcctgccatcgccccgcttggcgtcggtccggacgctgaag
cacaatggggtggccttggacgcggcgctggtcctgcgcttcgaaaagccggccagttat
accggcgaagacagtgtcgagtttcacgtgcacggcggccgcgccgtggtcgaggccttg
cttgcggcgctgtcggaacttggggctcgcctggccgaggcgggcgagttcacgcggcgg
gcgttcgagaacggcaagcttgatctcgcccaggccgagggcgtggccgacctgatcgac
gccgagaccgaggctcagaggcgtcaggccctgggccaggtgggcggcgccttgagccag
cgctacgaccgctggcgtgatctgctggtccaggccttggccatgctggaggcggccgtc
gactttcctgatgaggatctgcccgaggaagtggccgagcgcgcccgtcctggactgcgc
caactcagcgccgaactgaacgcggcgctggcggacgtttcacgggggcggcgggtgcga
gacggcttccgcattgcgctcattggtgcgccaaacgccgggaagagcaccttactcaat
ggcctcgccgagcgggacgcggcgatcgtgaccgatgtggccgggaccacacgtgacgtg
attgaggtccccctggtgctgggcggctacaaggtgttggtcgcggatacggccgggata
cgcgagactgcggatgtgatcgaggccgagggtgttcgtcgcgccaaggcgtgggccgaa
gcggcggatcttcgtctttgggtcgtcgatggttttcacgtgaaacaagccgacgcgcgg
cctgaagcgatccgcgttggcgactggctgatcctcaacaagacggatatcgccgatgcg
gacgcctcggcgcatgtggcggagcgctgggcgggggaggggcttactgttctgcatatt
gcggggacgtctgctgagggtcccgaggccctccgcgccgcgctcgcgtctcacgtggcg
gacgctttgtcgggcgcggagttcccggccgctacccgtctgagacatgccgagcgcctg
tcagaggcgcggtcctatctggaacgcgcgctgtcggatgtcgggctggaggtggagttg
gccgctgaagatgtgcggctggcggcccgggccctggagcgcatctccggccgtatcgat
cctgaggacgttcttggacgggtcttttcgaccttctgtatcggcaagtga
DBGET
integrated database retrieval system
