Coprococcus catus: CC1_00580
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Entry
CC1_00580 CDS
T02584
Name
(GenBank) Superfamily II DNA/RNA helicases, SNF2 family
Organism
cct
Coprococcus catus
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2_assoc
SNF2-rel_dom
Helicase_C
ERCC3_RAD25_C
SWIM
Motif
Other DBs
NCBI-ProteinID:
CBK79036
UniProt:
D4J3W5
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Position
complement(56871..60161)
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AA seq
1096 aa
AA seq
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MAITRMTVIKAASDADYRKGQDIFLIDKRIRNFETDINTLTHTPMITATVLDADGTEHET
QVSIDEEESQIIGSLCSCPDFYQAQGICCHCVAILLKYISRRHIQASFPAKNQNRISQNL
IETYIQQSSGIHYTAESSDVKGQIELEPILHKQYKKLSVDFKVGTHKKYVIKDLLEFARL
VREHELFQYGKNLKFFHEPEAFTPESRKLLSFIMQRIEEYEYHFRYVQDSTYRFQTIKPL
RELPLSPTAIDTFLNLMLGRTLQFRLADQTQTIRVLDCDPLLTLSLKSEDNSTYKLTIDN
CLILSGASTFWILKDKTLYRCSENFRKDMQPYLTELNRQKTQEMILSEKQLRPFYGSVLK
RLQAHTDFQTNGIDLSGYEPPEAHFSIYLDHPSDQIFSCSAYAQYNEETFSLATPISPED
GFRDATMENKVLTAIQSYFHPVMASEDEKAPEVDGDFIIDHDDTASFLFLEQGLPHFYEL
AEVFISSNMKRVRILSAPKAAVGVSVSHGLLTLDIRSDHLPYDELAGILNSYRRRQKYYK
LKSGEFLKLENNSLSVLSELADGLRLSEKDIANGQMTVPLYRASYIDAVLTSHNSDMQSH
RDRYFKSLIRDMKSVADSDYEVPDAMKPILRDYQKTGYRWLCTIAHLGFGGILADDMGLG
KTLQIITLLEHTRLTAAERTDGGHPVSLIICPSSLVYNWDSEIEHFAPALKTLLITGTAQ
ERQDLLTHAADYDVLITSYDMLKRDITYYDALHFQYQIIDEAQYIKNHRTQAARSVCSIH
SVTRFALTGTPIENRLSELWSIFEYLMPGYLYPYAHFRSELEQPIVESKDPIATTRLQQL
VRPFIMRRLKTDVLKELPDKLEHAVYAQMTEEQQKLYVANAVQLQKELESQNDSMFKASK
IQILAELTKLRQLCCDPALIYKNYHGGSAKLDTCIQLIQNARAGGHKILLFSQFTSMLDI
IEHRLKLEHILYYRLDGSTKSEQRTRLVNAFNENAIPVFLISLKAGGTGLNLTGADIVIH
YDPWWNAAAQNQATDRAHRIGQTHTVTVYKLIARHTIEEKILELQENKKALSDQILSEEG
VTASQLTKEELLQILQ
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggcaattacgcgaatgactgttatcaaagccgcttccgatgccgattaccgaaaaggc
caggatatctttctgatagataagcgaattaggaattttgagacagatatcaatacatta
acccatacaccaatgattactgctacagtccttgatgccgacggaacagagcatgaaacc
caagtctccattgacgaagaggaaagccagattattggcagtttatgttcctgccctgat
ttttatcaagctcagggaatatgctgccattgtgttgctatccttctcaaatatatttcg
agacgtcacattcaggcaagttttccagctaaaaatcagaaccgcatcagccaaaattta
attgagacatatattcaacaatcttccggcattcattacaccgctgaatcttcagatgtc
aaaggacagattgaactggaaccaattcttcacaagcaatataaaaaactctctgtggat
ttcaaagttggtacccataagaaatatgtcatcaaagatctcctcgaatttgcccgtctt
gtccgcgagcatgagttatttcaatatggcaaaaatttaaagttcttccatgaacccgaa
gctttcacccctgaaagccgcaagcttctttctttcattatgcagcgtattgaagaatac
gaatatcactttcgctatgttcaggacagcacttatcgttttcagacgatcaaacccttg
cgcgaactgccattatcaccaacagccattgacacttttctgaatctgatgctcggtcgc
actttacaattccggttggccgatcaaacccagacgattcgtgtccttgattgtgatcca
ttactcacgttatcgcttaaatccgaggataacagcacatacaaactgactatcgacaat
tgtcttatactatctggcgcttctacattttggattttaaaagataaaactctctatcgt
tgttcggaaaattttagaaaagatatgcagccttatctgactgaattgaatcgtcaaaag
acacaagaaatgatcctttctgaaaagcaattgcgtccattttatggcagtgttctcaaa
cgcctgcaggcgcatactgattttcagaccaatgggattgacctatccgggtacgagcca
cctgaagcacatttcagcatctatctggatcatccttctgatcaaatttttagctgttct
gcttatgcacagtataatgaggagactttttccctggcaacacccatttctcctgaggac
ggcttccgcgatgccacaatggaaaacaaagtccttactgccatacaaagctattttcat
cctgtgatggcttcggaagatgaaaaagcaccagaggttgatggcgattttatcattgat
catgacgatacagcatcttttctttttctggaacagggcctgccacatttttatgaatta
gcagaggtattcatatcctctaatatgaaacgcgtccgcattttatctgcgccaaaagca
gctgttggggtttctgtctctcatggacttttaacactggatatccgctctgatcatctg
ccttacgatgaactggctggaattttaaatagttatagacgcagacagaaatattataaa
ctgaaatccggtgaatttcttaaacttgaaaacaattcgctaagtgtcctctctgaattg
gcagatggtctccggctatcagaaaaagacatcgccaatggtcaaatgacggtgcctttg
tatcgtgcttcctatattgatgccgttcttaccagccacaacagtgatatgcagtcccat
agagaccgttattttaaatcgctgattcgtgatatgaaatctgtggctgacagcgattat
gaagttcctgatgccatgaaacccattctgcgtgactatcagaaaaccggctatcgctgg
ctttgtaccattgcgcatctcggttttggcggtattctcgctgatgatatgggactcggt
aaaactttacagataataacactcctggagcatacccgattgacagctgccgaaagaaca
gacggcggtcatcctgtcagcctgatcatctgcccttcttccctggtctacaactgggat
agcgaaatcgaacattttgcgcctgctttaaagacgcttctgatcaccggtaccgctcag
gaacgacaggacttattgacacacgctgcagattatgacgtgcttatcacttcatatgat
atgttaaaacgtgatatcacatattatgacgcactccatttccagtaccagattattgat
gaagcacaatacatcaaaaatcatcggacgcaagccgcccgctctgtgtgcagcattcat
tctgtgacccgcttcgcgctgacgggtacaccgattgagaaccgcctcagtgaattatgg
agtatttttgaatatctgatgcccggttatttatatccatatgcgcattttcgttctgaa
ctggaacagccaattgtggaaagtaaagacccgattgcaaccacacgactccagcagctt
gtgcgaccttttattatgcgtcgtctgaaaacagatgtcttaaaggaactgccggataaa
ctggaacatgctgtctatgctcagatgacagaggaacagcaaaaactctacgttgcaaat
gccgtccaacttcaaaaagagctagaaagtcaaaatgacagcatgttcaaagcaagtaag
attcaaattcttgctgaactgacaaagcttagacagctttgttgtgatcccgctctaatc
tacaagaattatcatggtggctctgctaaactggatacctgcattcaattgattcagaac
gccagagcaggcgggcacaaaatcctcctgttctcacagtttacttctatgttggacatt
attgaacaccgcctaaaactggaacatattctctactaccggcttgacggaagtaccaaa
agtgaacaacgtacgcgtctggtcaatgcctttaatgaaaatgcgatacctgttttcctg
atttctctaaaagcaggcggaacaggtctcaatctcaccggagcagatatcgtcatccac
tatgacccatggtggaacgcagccgcccaaaatcaggcaacagatcgggcacaccgtatc
ggtcaaacacatacagtcactgtctacaagctgattgcccgacataccattgaagaaaag
attctggaactgcaggaaaacaaaaaggctctgtcagatcagatactttcagaagaaggc
gtcactgccagccagctgacaaaagaggaactgctgcagattctccagtag
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