Coprococcus catus: CC1_01870
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Entry
CC1_01870 CDS
T02584
Name
(GenBank) DNA polymerase III catalytic subunit, DnaE type
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cct
Coprococcus catus
Pathway
cct03030
DNA replication
cct03430
Mismatch repair
cct03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CC1_01870
03430 Mismatch repair
CC1_01870
03440 Homologous recombination
CC1_01870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cct03032
]
CC1_01870
03400 DNA repair and recombination proteins [BR:
cct03400
]
CC1_01870
Enzymes [BR:
cct01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CC1_01870
DNA replication proteins [BR:
cct03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CC1_01870
DNA repair and recombination proteins [BR:
cct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CC1_01870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
tRNA_anti_2
DUF3106
Motif
Other DBs
NCBI-ProteinID:
CBK79152
UniProt:
D4J481
LinkDB
All DBs
Position
202976..206446
Genome browser
AA seq
1156 aa
AA seq
DB search
MDFTHLHVHTEYSLLDGSNKIKELIARVKELGMDSVAITDHGVMYGVIDFYKEAQKQGIH
PVIGCEVYVAPGSRFDKSGNMSSNRYHHLVLLAENDTGYHNLMKIVSKGFTEGFYYKPRV
DKELLKEYHEGIIALSACLAGEIPDALRKGLYQTALNAAQEMSEIFGEDHFYLELQDHGI
PDQKTVNQGLLRLAKDTGLELVATNDIHYTLAEDAQAHDVLLCIQTGKKVADTDRMRYEG
GQYYVKSPEEMASLFPYAREAIENTHKIAMRCHVDIEFGHYKLPEFPVPEGYDSWEYLQK
LVWDGFYERYPQADEKLKERVSYELNTIKTMGFVDYFLIVWDFIHYAKEHDIMVGPGRGS
AAGSIVSYCLDITTLDPIRYNLLFERFLNPNRVTMPDIDVDFCFERRQEVIDYVVRKYGK
ERVVQIVTFGTMAARGVIRDVGRVLDLPYAICDSVAKMIPNELGITIDKALKMNPELKKL
YDGDDSIHNLIDMARRLEGLPRHTSMHAAGVVISPKAVDEFVPLSRGADDVITTQYTMTT
LEELGLLKMDFLGLRTLTVIRNAVKLINADGRHHVDMHEIDYNDKAVFDMIGTGKTDGIF
QLESSGMKSFMKELKPHNLEDIIAGISLYRPGPMDFIPRYIKGKNEPASITYECPQLEEI
LEPTYGCIVYQEQVMQIVMKLAGYDLGRSDLVRRAMSKKKADVMAKERQYFVYGNDELGV
PGCIANGIDEATANRIFDEMTDFAKYAFNKSHAAAYTIVSYQTAWLKYYYPVEFMAALMT
SVIDNSVKVAEYIMTCRQMGIKILPPDINHGVSSFSVDNGRILYGLSAVKSIGRPVVAAI
EQERTLAGPFTSLKNFIERMSGKEVNKRSIENFIKAGAFDSFGATRRQQMMVYAQIMDQV
AQDRKKNISGQMTLFDFMDEEEKQAFEIRYPNVGEYDKGTLLSFEKEVLGVYISGHPLDD
VAESWRRNVTAVTSDFYVNEESGMPNVVDQSLVVIGGMVTGKTVKSTKNNKMMAFIQLED
LLGTVEVIIFPNDYEKYQAELTEEAKLYIKGRVSASEDQQAKLIAEKIIPFDKVPKEVWL
QYPDKNSFIGQQETLYKTLAGHSGNDRVIIFCKVEKAIKKLPVSWNIKAEEEILDQLGTV
LGKENVKVRETVLKSF
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggattttacacatttgcacgttcatacagaatacagtctgttggatggctccaataaa
atcaaagaactgatcgccagagtcaaggaacttggcatggacagtgtggccatcacagat
cacggtgttatgtatggtgtgattgatttttataaggaagcacagaagcagggcattcat
ccggtcatcggctgtgaggtttatgtggcaccgggttcacgttttgacaaaagcggcaat
atgagcagcaacagatatcaccatctggtattgcttgcggagaatgataccggttatcat
aatctgatgaaaattgtatccaaaggttttacggaaggcttttattataagccccgtgta
gataaagaacttttaaaagaatatcatgaaggcatcattgctctcagtgcctgcctggca
ggagagattccagatgcattgagaaaaggcctgtatcaaacggctttgaatgcagcacag
gaaatgtcagaaatcttcggtgaagatcatttttatctggaattgcaggatcatggcatt
ccggatcagaaaacggtgaatcagggattgcttcggctggcgaaagatacaggccttgaa
ttggtagcaaccaatgatattcattacacattggccgaagatgctcaggcgcatgacgta
ttgctgtgcatccagacaggcaagaaagtggcggatacggatagaatgcgttatgagggc
ggtcagtattatgtcaaatcaccggaagagatggcatcgctgttcccttatgcccgtgag
gctatcgagaatacgcacaaaattgccatgcgatgccatgtggatatcgagttcggtcat
tacaaactgccggaatttcctgtgccggaagggtacgattcatgggaatatctgcagaaa
cttgtctgggacggtttttatgaaagatacccgcaggcggatgagaagctcaaagagcgt
gtcagctatgaattaaataccatcaaaaccatgggattcgtggattatttcctgattgta
tgggattttattcattatgccaaagagcatgacattatggtcggaccgggccgaggttcg
gcagcaggaagcattgtatcctactgtctggatattacaaccctggatccgattcgctac
aatttactctttgagcgattcctgaatccgaaccgtgtgacgatgcccgatatcgacgtg
gatttctgttttgaaagacgacaggaagtcattgattatgttgtcagaaaatatggcaaa
gagcgcgtggtgcagattgttacatttggtacaatggcagcgcggggtgtgatccgtgat
gtggggcgtgtcctggatctgccttatgccatctgtgatagtgtggccaagatgattccg
aatgagcttggtattaccatcgataaggcgctgaagatgaatccggagctgaaaaagctc
tatgacggggatgacagtatccacaatttgattgatatggcaagaagactggaaggcctg
ccgcggcatacatccatgcatgctgccggtgttgttatcagcccgaaggctgtcgatgag
tttgtaccgctgtcgagaggcgcagacgatgtgatcacgacacaatacaccatgaccacg
ctggaagagctgggactgctgaaaatggactttctggggctgcgtacactgactgttatt
cggaatgcagtgaagctgatcaatgcagacggtcggcatcatgtggacatgcatgagatt
gattacaatgacaaggctgtttttgatatgatcggaacaggaaaaaccgacggtattttt
cagcttgaaagttcaggaatgaagagcttcatgaaggaactgaaaccccataatctcgag
gatatcattgcaggtatttcgctttatcgtccagggccaatggattttattccgcgttat
atcaagggaaagaacgaaccggcgtccatcacgtatgagtgtcctcagctggaagagatt
ctggaaccgacctatggctgtattgtctatcaggaacaggtcatgcagattgttatgaaa
ctggccggttatgatctgggacgaagcgaccttgtgcgtcgagctatgtcgaagaaaaaa
gcggatgtgatggcgaaggaacgccagtactttgtgtacggcaatgatgaactgggtgtg
cccggctgtattgccaacggtattgatgaggcgacggccaacaggatctttgatgagatg
acggattttgccaagtatgccttcaataagtcccatgcagcagcctataccattgtttct
tatcagacagcatggctgaaatactactatccggtagagttcatggcggctctgatgaca
tctgtcatcgacaattcagtgaaagttgcagaatatattatgacctgcagacagatgggc
attaagatactgccgccggatattaatcatggcgtcagcagtttctctgtggacaacggc
agaatcctttacgggctttctgcggtcaaaagtatcggaagaccggtggtggcagccatt
gaacaggagagaaccctggcgggaccatttacaagcctgaagaatttcattgagcgtatg
agcggcaaggaagtcaataaacgttccattgagaattttatcaaggcaggtgcctttgac
agctttggagccacaaggcggcagcagatgatggtttatgcgcagattatggatcaggtg
gctcaggacagaaagaaaaatatcagcggtcagatgacattattcgatttcatggacgaa
gaagaaaaacaggcttttgagattcgttatccgaatgtgggtgagtatgacaaaggcacc
ctcctttcctttgagaaggaagtcctcggggtatatatcagcggacatcctctggatgat
gtggctgagagttggcgcagaaatgtcacggcggtgacctccgatttctatgtcaatgag
gaaagcggtatgccgaatgtggtcgatcagtcattggtggtcattggcggtatggtgacg
ggcaaaacagttaaatcaacaaagaacaataagatgatggcttttattcagttggaggat
ctgctgggaacagtagaagtcattatttttccgaatgattatgagaaataccaggctgag
ctgacagaggaggcgaagctctacatcaagggccgtgtgtctgcttcggaggatcagcag
gcgaaactgatcgcggagaagatcattccttttgataaggtgccaaaggaagtatggttg
cagtatccggacaagaacagctttatcggacagcaggaaaccctgtacaaaaccctggcg
gggcattcgggtaatgaccgggtcatcatattctgtaaagtggaaaaagccattaagaaa
ctgcctgtatcatggaatataaaggcagaggaagaaattcttgaccagcttggaacagta
ttgggaaaagaaaacgtaaaagttcgggaaactgtcttgaaaagcttctaa
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