Coprococcus catus: CC1_11390
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Entry
CC1_11390 CDS
T02584
Name
(GenBank) uncharacterized domain HDIG
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
cct
Coprococcus catus
Brite
KEGG Orthology (KO) [BR:
cct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cct03019
]
CC1_11390
Messenger RNA biogenesis [BR:
cct03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CC1_11390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
CBK79963
UniProt:
D4J6J2
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All DBs
Position
1178919..1179860
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AA seq
313 aa
AA seq
DB search
MRYINELKSGDMISDIYLCKTKQTLKTKAGKSYYSMMLQDKTGTVDAKVWELTPGIEYFE
PMDFIKVEGQVTSFQGSLQLNLRRIRRAKEGEYIPADYMPCSRYSIEDMYKELMGYVDSV
KEPHLHELLELFFVKNTAFIKSFKEHSAAKSIHHGFVGGLLEHTLSVTKLCDFYTTRYPH
LNHDLLITAAICHDIGKTKELSLFPSNDYTDEGQLIGHIVTGVEMIHDAIREIPGFPVVL
ANELKHCIVAHHGELEYGSPKKPALMEAMALNLADNTDARMETMTEIFDRSEDNLEWLGF
NRIFESNIRRTSK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagatatattaacgaattaaaatcaggcgatatgatttcagatatttatctgtgcaaa
acgaaacagacattgaagacgaaggctggcaagagctattattccatgatgcttcaggat
aagaccggtacagtggatgctaaggtctgggaactgacaccgggcattgaatattttgag
ccgatggactttatcaaggtagaagggcaggtgacttctttccagggatcactgcagctg
aatctgcgccgtatccgtcgtgccaaagagggcgaatatattccggcagattatatgccg
tgcagccgctatagtatagaagatatgtacaaagagctgatgggatatgtagacagcgtc
aaagaaccgcatctgcatgaattactggaattattctttgtaaagaatacagcatttatc
aagtcttttaaggagcattctgcagcgaagagcattcatcatggttttgtgggcggactg
cttgaacatacacttagcgtaacaaaactctgcgatttttatacaacccgttatccgcat
ctgaaccatgacctgctgatcacagcagctatctgtcatgatattggcaagacaaaggaa
ttatccttattcccatccaatgattatacagatgagggacagcttatcggccatattgtg
acaggtgtggagatgatccatgatgccatccgtgagattccgggattccctgttgtattg
gccaacgagttgaagcattgtatcgtggcccatcacggcgagctggaatacggttcaccg
aagaaaccggcactgatggaagctatggcactgaatctggcggacaatacagatgcccgt
atggagacgatgacagagatcttcgaccgttcagaagataatttggaatggcttggattt
aaccgcatttttgagtcgaatatcagaagaacgtccaaataa
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