Coprococcus catus: CC1_12900
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Entry
CC1_12900 CDS
T02584
Name
(GenBank) helicase, putative, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cct
Coprococcus catus
Pathway
cct03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CC1_12900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cct03400
]
CC1_12900
Enzymes [BR:
cct01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CC1_12900
DNA repair and recombination proteins [BR:
cct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CC1_12900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
AAA_22
PIF1
UvrD-helicase
HHH_2
AAA
Helicase_RecD
nSTAND3
NTPase_1
AAA_28
NPHP3_N
SLFN-g3_helicase
AAA_16
T2SSE
MeaB
AAA_23
UvrD_C
AAA_29
AAA_17
Cro
ABC_tran
SRP54
6PF2K
Mg_chelatase
cobW
AAA_24
Motif
Other DBs
NCBI-ProteinID:
CBK80090
UniProt:
D4J6W9
LinkDB
All DBs
Position
1333237..1335459
Genome browser
AA seq
740 aa
AA seq
DB search
MESIQGLVEHIVYHNDTNGYTVFSLMCQGEEIVCVGNVTSLDEGEYLKAEGEYTEHQVYG
RQFKVTSMSVEVPEDEYSIERYLGSGAIRGVGPSLAARIVKKFKKDSFRIIEEEPERLAE
IKGISERKAREIYQQFHEKQDMRQAMMFLAKYGITTTLSLRIYKQYGEEMYRIIQENPYR
LADDMNGIGFKLADEIAKKAGIGSHSDFRIRSGIIYMLQQGTLSGHIYIPAALLVEKTAQ
MLGVEEEAVDHLLQSLQMDRKIVVKKIDDVSVVYGASLYRLELETAGLLKNLGVDYSVDE
KEVGKVLDRIEKREGIDLDDHQREAVYSAAGNGVLVITGGPGTGKTTTINAIIKYLEYEG
LEMRLAAPTGRAAKRMSEATGREAQTIHRMLELSGGPDDDRLRTQFERNQDNPLETDVVI
IDEMSMVDIYLMNALLKAIAVGTRLILVGDVNQLPSVGPGNVLKDIIDSECFQVVRLTKI
FRQALESDIIKNAHLINEGRQIELGNKSQDFFCLKRYDVQQILGVMVLLIRDKLPKFVNA
KPYDIQVLTPMRKGELGVERLNTVLQHYLNPPSSDKKEREFHQGVIREGDKVMQIRNNYQ
IEWEVLGHYNLPLDKGVGVFNGDMGVVREINHFAEQLVVEFDEGRRVTYGFAQLDELELA
YAITIHKSQGSEYPAVIMPLLSGPRMLFNRNILYTAVTRAKQCVAIVGDEHTVRHMIENE
KQQKRYTSLNLRLREMNTLS
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcatacagggacttgtggagcatattgtctatcacaatgacaccaatggatat
acagttttttccctgatgtgccagggggaagagattgtctgtgtgggaaatgtcacttcg
ctggatgaaggagaatatctcaaggcagagggtgaatatacggaacatcaggtatatgga
agacagttcaaggtgacttccatgagtgtggaagtgccggaggatgaatattccattgaa
agatatctcggttccggggccatcaggggtgtgggaccgtcactggcagcccgcattgtc
aagaaattcaaaaaggattctttcaggatcattgaagaagaaccggagcggttggctgag
atcaagggcatcagtgaacgcaaagccagggagatctatcagcagtttcatgagaagcag
gatatgcgtcaggccatgatgtttctggcgaaatacgggattacaacaaccttatccctg
agaatttacaaacagtacggcgaggagatgtaccggatcattcaggagaatccgtaccgg
ctggccgatgatatgaacggcatcggtttcaaattggcggatgagatcgccaaaaaggcc
gggattggttcccattcagattttcgaatccgcagcggcattatctatatgctgcagcag
ggaaccctttccgggcatatttacataccggcggcattgctggtggagaagacggcccag
atgctgggggtggaagaagaagctgtggaccatctgcttcagagcctgcagatggaccgc
aagattgttgtgaagaaaatagacgatgtgtcggtggtgtatggagcctcactttaccgc
ctggagctggagaccgcgggacttctgaagaatcttggtgtcgattacagcgtggatgag
aaggaagtaggaaaggttctggaccgtattgagaaaagggaaggcattgatctggatgat
caccagcgtgaagcggtgtattctgctgcaggcaatggggtgcttgtcatcaccggcggt
cccggtaccggtaaaaccacgacgattaatgccattatcaaatacctggaatatgaaggg
ttggagatgcgtctggcggcgccgacgggaagagcggccaaacgtatgtcagaagccaca
ggacgggaggcccagaccattcaccggatgctggaattatcaggcggaccggatgacgac
cgcctgcgaacacagtttgagcgcaatcaggacaatcccctggaaacggatgtggtcatt
attgatgagatgtctatggtggatatctatctgatgaatgcccttttgaaggccatagcc
gtgggcacaaggctgatccttgtaggggatgtgaaccagctgccgagtgtcggaccgggc
aatgtgctgaaggatatcattgattctgaatgttttcaggtggtacgtctgacgaagatt
ttcagacaggcactggaaagcgatatcattaagaatgcccatctgatcaatgagggacgg
caaattgaacttggcaacaaaagccaggactttttctgcctgaaacgatatgatgtccag
cagattctgggggtcatggtgcttctgatcagagacaagcttccgaagtttgtcaatgca
aagccttacgatatccaggtgctgacgccgatgcgcaaaggagaactgggggtagagcgg
ctgaataccgtactgcagcactatctgaacccgccgtcttcggacaagaaagagcgcgaa
tttcatcagggtgttatccgtgaaggggacaaggttatgcagatcaggaataattatcag
atcgaatgggaagtgctgggacattataatctgcctttggacaagggcgtgggcgttttt
aacggcgatatgggcgttgtccgggagatcaatcattttgcggaacagctggtggtagaa
tttgatgaaggacgcagggtgacctatggttttgcacagcttgacgaactggaactggct
tatgccattacaatccacaaatctcagggcagtgagtatccggctgtcattatgccgctg
ctgtccggcccgcgcatgctgtttaacagaaatattctttatacagcagtgacccgtgcc
aagcagtgtgtggccattgtgggggatgagcataccgtccgtcatatgatcgagaatgaa
aaacaacaaaagagatatacgtctttgaatctgcgtctcagagaaatgaatacactttca
tag
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integrated database retrieval system
