Pseudocoprococcus catus: CC1_20910
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Entry
CC1_20910 CDS
T02584
Name
(GenBank) Predicted HD-superfamily hydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
cct
Pseudocoprococcus catus
Brite
KEGG Orthology (KO) [BR:
cct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cct03019
]
CC1_20910
Messenger RNA biogenesis [BR:
cct03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CC1_20910
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
CBK80806
UniProt:
D4J8Y5
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All DBs
Position
2145079..2145570
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AA seq
163 aa
AA seq
DB search
MVTAADKVADNYYEILNRSLLVTGTALHDIGKLVELETTTLGSATYGVDGGLFGHLMIGC
EMITKAAEEIGDVDAEELRLLKHMIASHHGTLEFGALAKPAIPEATVLNLIDTIDARMFI
YERELKGIQPGEMTNPVFGMDNTCLYRSPLCHIPDATDVKDEQ
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atggttacggcagcagataaagtggcagacaattattatgagattttgaaccggtcactg
cttgttaccggtaccgctcttcatgacatcggaaagctggtcgaactggaaacaacaacg
ctcggctctgctacatacggtgttgatggcgggttgtttggtcatttgatgattggctgt
gagatgatcacaaaagcagctgaagaaatcggtgatgttgatgcggaggagttgagatta
ttaaagcatatgatcgcctctcatcacggaactttggaattcggtgcacttgcaaagcca
gctattcctgaagcaacagtgttaaatctgattgacacaatagatgccagaatgttcatt
tatgagcgcgagcttaaaggcatccagcctggagaaatgacaaatccggtatttgggatg
gacaatacctgcttgtaccgcagccctctttgccatattccagatgccacagacgttaaa
gacgaacagtaa
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