Coprococcus catus: CC1_25380
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Entry
CC1_25380 CDS
T02584
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
cct
Coprococcus catus
Brite
KEGG Orthology (KO) [BR:
cct00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CC1_25380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cct03021
]
CC1_25380
Transcription machinery [BR:
cct03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CC1_25380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Sigma70_r4_2
HTH_20
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
CBK81185
UniProt:
D4JA14
LinkDB
All DBs
Position
complement(2574481..2575581)
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AA seq
366 aa
AA seq
DB search
MDEAVFLQILNSLLEKAKKKKNELDYGDINDAFKGFEFDEEKMEEVYEFLEAKNIDIINI
PEAQDDDDEFLDHQEEEVELLDDVDALEGVSLEDPVRMYLKEIGSVKLLSPEEEVELSKR
AEAGDQKAKDRIIEANLRLVVSIAKKYVGRGIPFLDLIQEGNMGLIKAVEKFDYAKGFKF
STYATWWIRQSITRGIADKGKTIRVPVHMVETINKTLRMSRNLLQELGREPTSEEIAERL
GTTKQKVEEALEISRDPVSMDSPIGEEEDSSLGDFIEDENMLSPSDSADYQMLKKELVNA
LDTLTDRERKVIELRFGLIDGQARTLEEVGKEFKVTRERIRQIEAKALRKLRHPSRSRKL
KDFLQE
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagctgtatttttgcagatcttgaatagtttgctggagaaggcaaagaagaaa
aaaaatgagcttgattatggcgacatcaatgatgcgttcaagggcttcgagtttgacgag
gagaagatggaagaagtttacgaattcctggaagcgaagaatattgatattatcaatatt
ccggaagcacaggatgacgatgatgagtttctcgatcaccaggaagaagaagttgaactg
ctggatgatgttgatgcactggaaggtgtcagcctggaagatcctgtcagaatgtatctg
aaggaaataggaagtgtgaagcttttatcccctgaggaggaagttgagctttccaagaga
gcagaagcgggtgaccagaaggccaaggatagaattattgaagccaatcttcgtctggta
gtcagtattgcgaagaagtatgtgggccgcggcattccgttccttgatttgatccaggaa
ggcaacatgggtctgatcaaagctgtcgagaagtttgattatgccaagggattcaagttc
agtacatatgcaacctggtggatccgccagtctattacccgaggtattgctgataaaggt
aagacaattcgtgtgcctgtgcacatggtagagacaatcaacaagacattgcgtatgtcc
aggaatcttttacaggagctgggaagagaacctaccagcgaagagattgcagagcgtctt
ggaacaaccaaacagaaggtagaagaggctcttgagatttcacgtgatcctgtttctatg
gacagcccgattggtgaggaagaagattccagtctcggagattttatcgaagatgagaat
atgctttcaccatctgattcggctgactatcagatgctgaagaaggaactggtgaacgca
ctggatacgttgacagaccgtgaacgcaaggttattgagcttcgttttggcctgatcgat
ggacaggccagaacactggaagaggttggcaaggaatttaaggttacgcgtgaacgtatt
cgtcagattgaggcgaaagcgctgcgcaagctgagacatccgtccagaagccgcaagctg
aaggatttccttcaggagtaa
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