Coprococcus catus: CC1_28630
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Entry
CC1_28630 CDS
T02584
Name
(GenBank) Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cct
Coprococcus catus
Brite
KEGG Orthology (KO) [BR:
cct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cct03032
]
CC1_28630
03400 DNA repair and recombination proteins [BR:
cct03400
]
CC1_28630
Enzymes [BR:
cct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CC1_28630
DNA replication proteins [BR:
cct03032
]
Prokaryotic type
DNA Topoisomerases
CC1_28630
DNA repair and recombination proteins [BR:
cct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CC1_28630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SAM_Exu
Motif
Other DBs
NCBI-ProteinID:
CBK81465
UniProt:
D4JAU4
LinkDB
All DBs
Position
complement(2917606..2919843)
Genome browser
AA seq
745 aa
AA seq
DB search
MQEQIIRTDYAEVMQKSYVDYAMSVIISRALPDIRDGLKPVQRRTLYDMYELAIRYDKPY
RKCARIVGDTMGKYHPHGDSSIYDALVVMAQEFKKGMPLVDGHGNFGSIEGDGAAAMRYT
EARLQKVTQEVFLADLDKDVVDFMPNFDETEKEPTVLPVRLPNFLVNGSDGIAVGMVTST
PPHNLGEVIDAVKAYMKNDKLTTADLMQYIQGPDFPTGGIVTNKDELLNIYETGSGKIKL
RGRVEVEQDKGGKLRLVITEIPYTMIGANIGKFLNDVYALVESKKTTDIIDISNQSSKEG
IRIVLELKKQTDVDNLLALLYKKTRLEDTFSVNMLAIADGRPETLGLKSIIEYFLDFQYD
LTTRKYQKLLAKELEKQEIQEGLMRATDIIDLIIEILRGSKNIKQAKACLMTGTTEGIRF
KSKASERAASALDFTERQATAILEMRLYKLIGLEMDALLKDHDATLKNIASYKDILENHK
SMSRVISHDLDMIKKTYATPRKTSIENVRAAVYEEKKAEAMEVVALIDRFGYAKTIDKAT
FERNKEAALSENKYVIDCMNTDKACIFTDTGRLHLIKITDMPFGRFRDKSIPLDNLGNYD
SSGENIIHICSLASIHDAMLLFVTKTGMLKLVKGSEFDVSKRTVAATKLADGDNIITICI
ADNFNQLVLQTENGYFIRFPMMNIPEMKKTAIGVRGISLGSGDSVKAAYPLDSSQECTII
HNEKELLLNKLKLVNRGGKGTKVRV
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaacagattattcgcacggattatgcagaagtcatgcagaaatcctacgtagat
tacgccatgagcgttattatatccagagcacttccggatatccgggacggcttaaagccc
gttcagcgccgtacgttatatgatatgtacgaactggctatccggtacgacaagccatac
cgtaaatgtgcccgtatcgtcggtgatacaatgggtaagtatcatcctcacggtgacagc
tccatttacgatgcccttgttgttatggcccaggaattcaagaagggcatgcccctggta
gacggccacggcaatttcggctccatcgaaggtgatggtgccgccgccatgcgttacacc
gaagcccgtcttcagaaagtcactcaggaagttttcctggcggatcttgacaaggacgtt
gtagactttatgccgaactttgatgagacagagaaagagccgacggttctgcctgtccgt
ctgccgaatttccttgtcaacggttctgacggtatcgctgtcggcatggtgacaagtacc
ccgccgcataatctcggcgaggtcatcgatgccgtcaaagcctacatgaagaatgacaaa
ctgaccaccgctgacctgatgcagtacatccagggaccggattttcctaccggcggtatc
gtaacgaacaaagacgaattactgaatatttacgaaaccggcagcggcaagatcaagctt
cggggtcgtgttgaggttgagcaggacaaaggcggcaagcttcgccttgtcatcaccgag
attccttatacaatgatcggtgccaatatcggcaaatttctcaatgatgtttatgccctt
gtagaaagcaagaagacaacggacatcatcgatatttccaatcagtcctccaaggaagga
attcgtatcgttctggaactgaagaaacagacagacgtggacaatctgctggcacttctc
tataagaagacacgtctggaagatactttcagcgtgaatatgctggcgattgcagatggc
cgacctgagacgcttgggctcaagagcatcatcgaatatttccttgatttccaatacgat
ctgaccactcgcaaataccagaagcttcttgccaaggaactggagaaacaggaaatccaa
gaaggtctcatgcgtgccaccgatatcattgacctgatcatcgaaatcctgcgtggcagc
aagaatatcaaacaggccaaagcctgcctgatgacaggcactaccgaaggcattcgcttc
aagagcaaggcctctgaaagagccgcttctgcccttgattttacagaacgtcaggccact
gcaatcctcgagatgcgtctgtacaagctgatcggtctggaaatggatgccctgctgaaa
gatcatgatgctactttgaagaatatcgcttcctacaaggatatccttgagaatcataag
agcatgtcccgggtcatcagtcatgaccttgatatgatcaagaagacttatgccacaccg
cgtaaaacctctatcgagaatgtccgtgctgctgtttacgaagagaaaaaggccgaagct
atggaagtcgtcgctttaatagaccgttttggctatgctaagaccatcgataaagccact
tttgagcgtaacaaagaggccgcactttctgagaacaaatacgtcattgactgtatgaat
acagataaagcctgcatcttcacagataccggccgcctccatctgatcaagattactgat
atgccgttcgggcgtttccgtgacaaatccattccgctggacaacctgggcaactatgac
agctccggcgagaatatcattcacatatgcagtcttgcatctattcacgatgcgatgctg
ctgtttgtaacaaagacaggtatgctgaagcttgtcaaaggcagtgaatttgatgtctcc
aagcgtaccgttgctgccaccaagctggcagatggcgacaacatcatcaccatctgcatt
gcagataacttcaatcaattggttctgcagacagaaaacggctattttatccgcttcccg
atgatgaacatcccagagatgaagaagaccgccattggcgtccgcggcatcagcctcggt
tccggtgacagcgtcaaagctgcttatccactggacagcagccaggaatgcaccattatc
cacaatgaaaaggaattactgttgaataagttgaaacttgtcaacagaggcggaaaaggc
acaaaagtccgcgtttaa
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