Coprococcus catus: CC1_30020
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Entry
CC1_30020 CDS
T02584
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cct
Coprococcus catus
Brite
KEGG Orthology (KO) [BR:
cct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cct03016
]
CC1_30020
Enzymes [BR:
cct01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CC1_30020
Transfer RNA biogenesis [BR:
cct03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CC1_30020
Prokaryotic type
CC1_30020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CBK81573
UniProt:
D4JB52
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All DBs
Position
3056634..3057554
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AA seq
306 aa
AA seq
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MYDGMINVCKEKGFTSHDVVAKLRGILHQKKIGHTGTLDPDATGVLPVCLGKGTKLCDMI
TDRDKTYRAVMMLGRTTDTQDISGQILTEKAVNVDEREVRDAAVSFVGDYMQIPPMYSAI
KVDGKKLYELARAGQEVERKARHVVINALNITGIQLPYVTMEVSCSKGTYIRTLCQDIGE
KLGCGACMTELVRLKVGAFDIAHAWTLAQIQEMAACGEEEVRRHIVPVEEMLSDYPEFKT
TDAFSDKMLANGNWLPREQVATSGGDASAVLKDGMQVRMYSSTGNFTAIYQYVAVKNSLK
NIKMFV
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtacgatggaatgattaatgtctgcaaggaaaaaggttttacatcccatgatgttgta
gcaaaactcaggggaatccttcatcagaagaaaatcggccatacgggtacgctggatccg
gatgcaacaggggttctgccggtctgtctcggcaaaggaacaaagctctgtgatatgatc
acagaccgggacaagacttatcgcgcagtgatgatgcttggcagaactaccgatacacag
gatatttccggacagattcttactgaaaaggctgtgaatgtcgatgagcgtgaggtcaga
gatgcagcggtttcttttgttggtgattatatgcagataccgccgatgtattctgccatt
aaggtagatggcaaaaagttatatgagctggccagggccggtcaggaagttgaacgaaag
gccagacatgtggtgattaatgcactgaatatcacaggaatacagctgccttatgtcaca
atggaggtctcatgttccaaaggcacatatattcgtacactgtgtcaggatattggcgag
aaactgggctgtggtgcctgcatgacggaacttgtccgtttaaaagtgggggcatttgat
attgcacatgcatggacacttgctcagattcaggaaatggctgcctgcggtgaagaagaa
gtgcgcagacatattgtgcctgtcgaagaaatgctttcggattatccggaattcaaaacg
acagatgcattttcggataaaatgcttgccaacggcaactggctgccaagggaacaggtt
gcaacctccggcggtgatgcgtccgctgtactcaaagacggaatgcaggtgcgcatgtac
agcagcacaggtaattttacggcgatttatcagtatgtggccgtcaaaaacagcttaaaa
aatataaaaatgtttgtatag
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