Coprococcus catus: CC1_32000
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Entry
CC1_32000 CDS
T02584
Name
(GenBank) Rad3-related DNA helicases
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cct
Coprococcus catus
Pathway
cct03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cct00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CC1_32000
09124 Replication and repair
03420 Nucleotide excision repair
CC1_32000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cct03021
]
CC1_32000
03036 Chromosome and associated proteins [BR:
cct03036
]
CC1_32000
03400 DNA repair and recombination proteins [BR:
cct03400
]
CC1_32000
Enzymes [BR:
cct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CC1_32000
Transcription machinery [BR:
cct03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CC1_32000
Chromosome and associated proteins [BR:
cct03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CC1_32000
DNA repair and recombination proteins [BR:
cct03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CC1_32000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
Helicase_C
PhoH
Motif
Other DBs
NCBI-ProteinID:
CBK81746
UniProt:
D4JBM5
LinkDB
All DBs
Position
3234655..3237066
Genome browser
AA seq
803 aa
AA seq
DB search
MSQKTVTVSVRRLVEFILRSGDIDTVSGAFGEMDAMQQGGLMHRKLQKEAGPSYRAEVSL
KHTTEMDETLAITVEGRADGVITETEMAADESGELGLKEVVTIDEIKGTYRNLRYITEPV
SVHLAQAKCYAFFYAEKEDLEEIQVQMTYVHLKTGKVQRFREKMTRNELEVWYTELIDRF
AVWVRHQIAWIKKRNISIGAGSFPFEYRESQKKLVSGVYQTILRHRRLFVEAPTGTGKTI
SAIYPAVQAMGNGLSETIFYLTARTIARTVAEDTFGLLQDKGLAMKVITLTAKEKICVLD
KVQCSPEYCSRAKGHYDRINEAIYDLITHEDRMTRECILAYADKYQVCPFEFQLDAALFA
DAVIGDYNYVFDPNVALKRFFSDRSGDYLFLIDEAHNLVDRAREMYSAVMSMTELTHARH
AVEDKAVDRRLVTYMDRSILAMSALRESSEQSCQLMGNIGSLIVYLTKLSEQLEETLKEA
VPASLREVLMEFYFDIRRFICAFERSDDRYLIYALRSEDSFEIKIFCVDPSKDLGERLAK
GCGAVFFSATLLPVQYYKEMLSDTAVSDYDLYVDSPFAEENRLLVAATDVSSRYTRRGRK
EYERMAAYIRDIIRGKHGNYMVFFPSYQLMKDVFEVFTEMELMKAGHGLQLVVQESEMSE
DARQKFLDAFQADAADAVIGFCVMGGIFSEGIDLKEDRLIGVIIIGTGLPQVGEERELLS
RYFNEKSGRGFEYAYLYPGMNKVLQAAGRVIRTEKDRGVIALLDERFNYSQYRKLFPREW
HNCSKTSLNTIVQQVEDFWTDKA
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaaaaacagtcaccgtttccgttcgccggcttgtggagtttattctcagatcg
ggagacattgataccgtttccggcgcgtttggagaaatggatgcaatgcagcaggggggc
ctgatgcatcgaaaacttcaaaaagaggccgggccttcttacagggcggaggtgtctctg
aagcatacgacagaaatggatgagacgctggcgattactgttgagggacgtgccgatggt
gtcataacagaaactgagatggcagcagatgaaagcggcgagctgggactgaaagaagtt
gtgacaattgatgagattaaagggacttatagaaatttaaggtatatcacagagcctgtg
tctgttcatctggcacaggcaaagtgctatgcctttttttatgcggaaaaagaggattta
gaggaaatacaggtccagatgacgtatgtgcatttgaagacgggaaaagttcagcgtttt
agagaaaaaatgacacgaaatgagctggaagtatggtatactgaactgatagacagattt
gcagtctgggtgcgtcatcagatagcctggattaaaaaaagaaatatttctattggtgcc
ggcagttttccttttgagtacagagagagtcagaaaaagctcgtctcaggcgtttatcag
acgattctgagacatcggcggctttttgtagaagccccgacaggtaccggaaagacgatt
tccgccatttatccagctgttcaggcgatgggaaatgggttgtcagagacaattttctat
ctgacggcgagaaccattgccaggactgttgcggaagatacattcggacttcttcaggat
aagggacttgccatgaaggtgatcaccctgacggcaaaggagaaaatctgcgtgctggat
aaagttcagtgcagtccggagtactgttcaagggcaaaggggcattatgacaggattaat
gaagccatttatgatctgatcacccatgaagaccggatgaccagggagtgcatcctggct
tatgccgacaaatatcaggtttgtccctttgagtttcagctggatgcagctttattcgcg
gatgcggtcattggtgattataattatgtgtttgacccgaatgtggcgctcaaacgtttt
ttcagtgacagaagcggggactatcttttcctgatcgatgaggcccacaatctggtggat
cgtgccagggaaatgtacagtgccgtgatgtcaatgactgaattgacccatgcccgtcac
gcagtggaagataaagctgtggaccggcgacttgtcacttatatggatcgctcgatactg
gccatgtctgctcttcgggagtcttcagaacagtcctgccagctgatggggaatatcggc
agtctgatcgtttacctgacgaagctcagtgagcagctggaggaaacactgaaggaggcg
gttcctgcgtcactcagggaagttctgatggaattttactttgacattcgacgctttata
tgtgcctttgaacgatcggatgaccgctatttgatctatgcgcttcgaagtgaggacagc
tttgagatcaagattttctgtgtggatccttccaaagatctgggagaacgtctggcaaag
ggatgcggagctgtatttttctctgcaacgcttcttccggtgcagtactacaaggaaatg
ctcagtgatacagcagtatcggattacgatctttatgtggattcaccttttgcggaggaa
aaccgtctgcttgtagcggcaacagatgtaagcagccgctatacaaggcggggaagaaaa
gagtatgaacggatggctgcatatatccgggatattattcgtggcaagcatggcaattat
atggtctttttcccatcataccagcttatgaaggatgtttttgaagtttttacggaaatg
gaattaatgaaggcaggccatggtctgcagttggttgtgcaggaatccgagatgagtgaa
gatgcaagacagaagtttctggatgcttttcaggcggatgctgcagatgcagttattggt
ttctgtgtgatgggcggtattttttcggagggcattgatctgaaagaagaccggctgatc
ggtgtcatcattatcgggacaggactgccgcaagttggggaagagagagagcttttaagt
cggtattttaatgagaaatccggcagaggatttgaatatgcctacctttatccggggatg
aacaaggttttgcaggcagcaggacgtgtgatccgaaccgagaaggacagaggcgtgatc
gcgttattggatgagcgatttaattacagtcagtacagaaaactgttcccgagagaatgg
cacaattgcagtaagaccagtctgaatacaatcgtgcagcaggtggaggatttctggaca
gataaagcatag
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