Cryptobacterium curtum: Ccur_03820
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Entry
Ccur_03820 CDS
T00962
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ccu
Cryptobacterium curtum
Pathway
ccu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Ccur_03820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccu03021
]
Ccur_03820
03400 DNA repair and recombination proteins [BR:
ccu03400
]
Ccur_03820
Enzymes [BR:
ccu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Ccur_03820
Transcription machinery [BR:
ccu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Ccur_03820
DNA repair and recombination proteins [BR:
ccu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Ccur_03820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_A_CTD
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ACU94106
UniProt:
C7MMG6
LinkDB
All DBs
Position
443382..447773
Genome browser
AA seq
1463 aa
AA seq
DB search
MTEYDVNNFDALRISLASAEDIRSWSHGEVKKPETINYRTLKPEKDGLFCERIFGPTKDW
ECACGKYKRIRFKGIVCERCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGSPSRLGYLL
DIAPKDLEKVLYFASAIVTSVDKEAREEDEADLRDELAADLDELDAERDRLIASTRRLST
DYTPEDDEFVDDIEDEERLTPEEVEDELADIYEEFNERKALRSEAFEAFMKIEPKQLVAD
ETLYREMRLNYSEYFKGGMGAEAVRDLLDDIDLDEVAEELSEIIATGKGQKRAKAVKRLK
VVDAFLKSENKPHDMILDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLQRL
LDLGAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRALKSLADMLKGKQGRFRQNL
LGKRVDYSGRSVIVVGPELKLHQCGLPSAMALELFKPFVMKRLVELEYAANIKAAKRAVD
RGASYVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPVLTNGKAIKLHPLVCTAFNADFD
GDQMAVHVPLSSAAQAEARVLMLSSNNIKSPAHGRPLTIPTQDMIIGLYYLTTIRDGFAG
EGRVFASFDDVQHAYDAHADLDLQARISVRLPRDMTVVSSYGQAKECKAGERIETSAGRV
IINDVLPDDYPFLNYELDKTEVGRLISDCSNRYSTAAMEPILDGLKSNGFHYATKAGLTV
SIYDATIPDDKDEILAAADEKVAAIDGDYEMGLMSDEERHKQVVDIWTDATEEVGEAMAS
HFSGQNPIYMMATSGARGNIKQIRQLAGMRGLMADTKGEIIDTPIKANFREGMSVLEYFL
SSHGARKGLADTALRTADSGYLTRRLVDVSQDVIVRELDCGTTEGVTYALVDSKGELDEN
LVGRCLSEDVSDASGTRLASAGDYINSMDELTAWQQAGVEEVTIRTIMTCHAEHGVCQKC
YGWDLATARPVNIGTAVGIIAAQSIGEPGTQLTMRTFHSGGVAGDDITQGLPRVVELFEA
RKPKGQAVLAEIAGTLQISGDKQTKTITIHDQEGNYREYVTSARVQMMPGVVDGSEVTVG
QQITRGSVNPHDLLRLTDPNTTLRYIVGQVQDVYVSQGVDINDKHIEVIARQMLRKVAVL
DSGDSDYLPGRQVNRYEFEDVANQLVLEGKQPPVGQPLLLGITKASLATDSWMSAASFQE
TTKVLTDAAIESKTDQLVGLKENVIIGKPIPAGTGLKRYRNVGLTYKGHAVHEITSDTLP
DYAPEALRKVEELLPQPQDWSLDGDSYLNMGGSYSSYFNSLSAGRNSQLSDEDARLYIYD
DLGVSQRWANKFSEAGIETVGDLIGYSEEDLLRIEGIGAKAIEELKEGLEKHDLLHIIED
DLNATGDDMSQLLDMVFSPDDTILIGGDVPATFNTEGEDMLGEALPPRSYQRNLEELDAI
LGNVGDLNLHIDESSTDDSENEE
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagtacgatgtaaataacttcgacgcgctgcgcatctctctggcgagtgcggaa
gatattcgcagttggtcccatggcgaagtcaagaagccggagaccattaattaccgtacg
ctcaagcccgaaaaggatggcttgttctgcgaacgcatcttcggtcctacaaaggactgg
gaatgcgcctgcggtaagtacaagcgcattcgcttcaagggcatcgtgtgcgagcgctgc
ggtgttgaagtcaccagggcgaaggttcgccgcgagcgcatgggtcacattgaactggct
gctccggtgagtcacatctggtatttcaagggcagcccaagccgtttggggtacctgctt
gatattgcgccaaaagaccttgaaaaggttctctactttgcaagcgctattgtcacgtcg
gtggacaaagaagcgcgtgaagaagacgaagctgatctgcgggatgaattagctgctgac
cttgatgaactcgatgctgaacgcgatcgcctgattgcttcaaccaggcgtctgtcgacc
gattacacgcctgaagacgacgagtttgtcgacgatatcgaagacgaagagcgtctgacc
cctgaagaagttgaagacgaactagctgatatctatgaggaattcaacgagcgcaaggcg
ctgcgtagtgaagcgttcgaagccttcatgaaaattgaacccaagcagctggttgccgat
gaaaccctctatcgcgaaatgcgcctgaactacagcgagtatttcaagggtggcatgggt
gctgaagcagtacgcgatctgctggatgacatcgatcttgacgaggtagccgaggaactt
tccgaaattattgcaacgggcaagggtcaaaagcgcgccaaagctgttaagcgtcttaaa
gtggttgacgcgttcctgaagagcgaaaataaaccacacgacatgattcttgacgtgatt
ccggttattccacccgacctgcgtccaatggtacagctcgatggtggtcgttttgcaaca
agtgacttaaacgatttgtatcgtcgcgttattaaccgcaataaccgcttgcagcgtctg
ctcgatctgggtgcgccggagattattgtcaacaatgaaaagcgcatgctgcaagaagct
gtcgacagtctctttgacaatggccgccgtggccgtccagtaacgggtccgggaaaccgt
gcgctgaagtcgcttgccgatatgctcaaaggaaagcaggggcgcttccgccagaacttg
ctgggtaagcgtgtcgactattcaggtcgttcagttatcgtggttggtccagaactgaaa
ctgcatcagtgcggtctgccgagtgcgatggcgcttgagctgttcaagccattcgttatg
aagcgcctggttgaactcgaatatgccgctaatatcaaggctgctaaacgagctgttgac
cgtggggcaagctacgtgtgggacgtgcttgaagaggttattaccgaacatcccgtcctg
cttaaccgtgctccaaccctgcaccgtcttggcattcaggcatttgagcctgtgctgaca
aacggtaaggccatcaagctgcacccgcttgtttgtacggcatttaacgccgactttgac
ggcgaccagatggcagtgcatgtaccgctgtccagtgccgctcaggctgaagcgcgcgtg
ctgatgttgtcctctaacaacattaagtcgccagcacatggccgtccgctaactattccg
actcaggacatgatcatcggtctgtactacctgacgacgattcgtgacgggtttgccggc
gaaggacgtgtctttgcgagcttcgacgatgtgcagcatgcctatgatgcacatgctgat
ctcgacttgcaggcacgtatttctgtgcgtctgccgcgcgacatgacggttgtttcttct
tatggtcaggccaaggaatgcaaagcgggcgagcgtatcgagacgagtgctgggcgcgtt
attatcaacgatgtgttgcccgatgactatccgttccttaactacgaactcgacaagacc
gaggtcggacgcctgatcagtgattgctcgaaccgttattcgacagctgccatggagcct
atcttggacggtctcaagagcaacggtttccactacgctacaaaggcaggtctcacggtg
tctatttacgacgccacaattcctgatgataaggatgaaatcctcgctgcggccgatgaa
aaagtagctgcgattgatggcgactacgaaatgggcttgatgagtgacgaagagcgccat
aagcaggttgtcgacatttggacggatgcaactgaagaagtgggcgaggctatggcttct
cacttcagcggtcagaaccccatctacatgatggctacctcgggcgcccgcggtaatatc
aagcagattcgtcagctggccggtatgcgtggtctgatggctgacacgaagggtgagatc
atcgacacgccgattaaggcaaacttccgtgaaggtatgtcggtactcgaatacttccta
tcttcgcatggtgctcgtaagggtttggctgacacggcactgcgtactgctgactcgggt
tatctgacccgtcgtttggtggatgtttcgcaggatgttatcgtgcgtgaactcgactgc
ggtaccaccgaaggcgtgacgtatgcgctggtcgacagcaagggcgaactcgatgaaaat
ctggttggtcggtgcctgtctgaagatgtttctgatgcgtctggtacacgcttagcttcc
gcgggtgactacatcaacagtatggatgaactcactgcatggcagcaggcaggcgttgag
gaagttaccatccgcaccatcatgacctgccatgccgagcacggcgtgtgccaaaagtgc
tatggctgggatcttgcaacggctcgtccggtaaatatcggtacagccgtgggtattatt
gctgctcagtctattggcgagccgggtacacagctgacgatgcgtacgttccactcaggc
ggtgtcgccggcgacgacattacgcagggtcttcctcgtgttgtcgagctgttcgaggca
cgcaagccgaagggtcaggctgtcttggccgagattgctggtactttgcagatttcaggc
gacaagcaaaccaagacaatcactattcacgatcaagaaggcaactaccgcgagtatgtc
acttcggcacgcgtgcagatgatgccgggtgtggtagatggttcagaagttacggttggt
cagcagattacacggggttcagtgaacccgcacgacttactgcgtctgaccgacccgaac
accacgctgcgctatattgtggggcaagtccaagatgtgtacgtcagccaaggcgtcgac
atcaacgacaagcacatcgaagttattgcgcgtcagatgctgcgtaaggtggcagtgctt
gattctggtgattccgattatctgccgggtcgtcaggtcaatcgctacgaattcgaagat
gttgccaatcagctggtgctcgaaggcaaacagccgcccgttggtcagccgttgttgctg
ggcattacgaaggcatcgctggcaaccgattcgtggatgtcggccgcttcgttccaggaa
accaccaaggttcttaccgatgcagccatcgaaagcaagaccgatcagctggtcggcttg
aaagaaaacgttattatcggcaagccgattcctgctggtacgggtctcaagcgctatcgc
aacgtgggtcttacttataagggtcacgccgtgcatgaaattacaagcgacacgctgcct
gattatgcgcctgaggcgctgcgcaaggttgaagaactcctgccgcagccgcaggattgg
tcactcgatggtgatagctatctgaacatgggcggtagctattcgagctacttcaatagc
ctttcagctggtcgtaattcgcagctttccgatgaggacgcacgcctgtatatctatgat
gacctgggtgtctctcaacgctgggcgaataagttctccgaagcaggtattgaaaccgtg
ggcgaccttattgggtactccgaagaagacctattgcgtatcgaaggcatcggagcaaag
gcgatcgaggaactcaaagagggcttagaaaagcacgatttgctccatattattgaggac
gacctaaacgccacgggcgacgacatgagtcagcttttggatatggtgttctcgcccgat
gatacgattctcattggtggtgatgtgccggcaaccttcaacacggaaggcgaagacatg
ctcggcgaagcactgccaccgcgctcgtatcagcgcaatctcgaagagcttgatgcgatt
ctcggcaatgtgggcgatttgaacctgcatatcgatgagtcttcgactgacgattcggaa
aacgaggaatag
DBGET
integrated database retrieval system
