KEGG   Chryseobacterium cucumeris: JNG87_00730
Entry
JNG87_00730       CDS       T10197                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ccuc  Chryseobacterium cucumeris
Pathway
ccuc03030  DNA replication
ccuc03430  Mismatch repair
ccuc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ccuc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JNG87_00730
   03430 Mismatch repair
    JNG87_00730
   03440 Homologous recombination
    JNG87_00730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccuc03032]
    JNG87_00730
   03400 DNA repair and recombination proteins [BR:ccuc03400]
    JNG87_00730
Enzymes [BR:ccuc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     JNG87_00730
DNA replication proteins [BR:ccuc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     JNG87_00730
DNA repair and recombination proteins [BR:ccuc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     JNG87_00730
SSDB
Motif
Pfam: RNase_T ExoX-like_C RNase_H_2
Other DBs
NCBI-ProteinID: QRA43316
LinkDB
Position
144076..144840
AA seq 254 aa
MNLKLHKPLCIFDLETTGTNIGKDRIVEICILKVNPDASRESKTWRVNPEMPIPKECSEI
HGIYDEDVKDAPTFRDIAAKIMEMISGSDLGGFNSNRFDVPLLAEELLRVGMDFDLSKFR
LVDAQTIFHKKEPRNLGAAYQFYCGKTLENAHSAEADVMATFEVLDAQVGKYDDIPNEIA
PLSEFTFHNKNADLAGFIGYNEKMEEVFNFGKYKGQGVKAVFQKDLGYFGWLQNADFPLY
TKKIFTKIQLSSRF
NT seq 765 nt   +upstreamnt  +downstreamnt
atgaatttaaaactccataaaccgctttgtatttttgacctggaaaccacaggaaccaat
atcggaaaagacagaattgttgaaatatgtattttaaaagtaaacccggatgcctccaga
gagagcaaaacatggcgtgtaaatcctgaaatgccgattccaaaagaatgcagtgaaatc
cacgggatctatgatgaagatgtaaaagatgctcctactttcagggatattgccgctaaa
attatggaaatgatttcaggaagtgacctgggaggattcaattccaacaggtttgatgtt
ccgcttttggctgaagagcttttaagagtaggaatggattttgatctgagtaaattcaga
ctggtcgatgcacagactattttccataaaaaagaacctagaaatttaggtgcagcttac
cagttctactgtggaaaaacattggaaaatgcccactctgcagaggctgatgtaatggca
acgtttgaagttcttgacgctcaggttggaaaatatgatgatattccgaatgaaatagca
ccgttaagtgaatttacattccataataagaatgcagaccttgccggatttatcggatat
aatgaaaaaatggaagaagttttcaactttggaaaatataaaggacaaggcgtgaaagcg
gtattccaaaaagacttaggatatttcggatggcttcagaacgctgatttcccgttgtat
accaaaaagatttttacaaaaattcaattatcaagcaggttttaa

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