Chryseobacterium cucumeris: JNG87_03675
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Entry
JNG87_03675 CDS
T10197
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
ccuc Chryseobacterium cucumeris
Pathway
ccuc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccuc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JNG87_03675
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccuc02000
]
JNG87_03675
Enzymes [BR:
ccuc01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
JNG87_03675
Transporters [BR:
ccuc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JNG87_03675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA
RsgA_GTPase
AAA_22
DEAD
nSTAND3
AAA_15
AAA_18
AAA_25
ABC_ATPase
APS_kinase
SRP54
AAA_23
AAA_16
AAA_5
TrkA_N
AAA_29
TsaE
NACHT
AAA_30
AAA_17
AAA_24
Motif
Other DBs
NCBI-ProteinID:
QRA43866
LinkDB
All DBs
Position
828357..830195
Genome browser
AA seq
612 aa
AA seq
DB search
MNQYIKILKFARPHQKYIYGSLFFNLMYSVFQIASLGTILPVLGMLFGTIEAKKYSHPPV
YSGEILDFFSYAKEYANYYVQSLVTQYGALNVLAWLCVVTAFMFLLRNLFRYLGSFLLIN
YRVGVTKDLRGAMYRKILALPVSFFTESRKGDLMSRMSNDVGEVEGNILGSLVELINAPF
MLISTLVTLFFLSTEMTLFSLLVLPVMGTMIALIGKSLKKDSHEAQNEMGNIFSIVDETL
KSTKVIKIFSAEKIMDNRFMQSMQRWINSSISLGRKKELASPMSEFLGSVTFLIIAWYGG
KQIIVEQSISPADFLVFLGIFFQILPPVKSLSQSISNVQKGEASLERVLAILDADVKIDE
VPNPVSISTLKHSIEFNNIGFYYDKDHTILKNFSLSIPKGKTVALVGQSGSGKTTIANLL
ARFYDVSEGEILIDGTDIKHLKLQEYRKLLGMVTQESVLFNDSVYNNILMGKPDATREEV
IAAAKIANADAFITTLPEGYDSNIGDDGGKLSGGQKQRVSIARAVLKNPPIMILDEATSA
LDTESERFVQDALEKMMENRTSLVIAHRLSTIQKADWIVVMEKGDIVEQGTHHDLIAKRG
MYHKLVELQNFD
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaatatattaaaatactaaagttcgcaagacctcaccaaaaatacatctacgga
agtttgtttttcaatcttatgtattctgtatttcagattgcttccttaggaactattcta
cctgttttgggaatgcttttcggaaccattgaggctaaaaaatacagccatccccctgtg
tattcgggagaaattttagattttttctcctacgcaaaagaatatgccaattactatgtt
cagagtttagtaacccagtatggagcacttaacgttttggcgtggctttgcgtggtaaca
gcgtttatgtttttactgagaaaccttttcagatatttaggttcatttttattgatcaat
taccgtgtaggggttactaaagaccttcgtggagcaatgtacagaaagattcttgcttta
cctgtttccttttttacagaaagcagaaagggagatctgatgtcccgtatgtccaatgat
gtgggtgaagttgaagggaatattttaggaagtttagttgaattaatcaatgcacctttc
atgctgatcagtacattggtgactcttttctttttaagtacagaaatgactcttttctca
cttctggtattaccggtaatgggaactatgattgctttaattggaaaaagtctgaaaaaa
gactcccacgaagcacagaatgaaatggggaatatcttctcaattgtagacgaaacattg
aaatctacaaaggttattaaaatttttagtgcagaaaaaataatggacaaccgttttatg
cagtctatgcagagatggattaacagttctataagtctgggaagaaaaaaagaattagca
tctccgatgagcgaatttttaggttcagtaacattcttaattattgcttggtatggggga
aaacaaatcattgtagaacaaagtatttcacctgcagattttttggttttcctgggtatt
ttcttccagattttacctcctgtgaaaagtttatctcaatctatttcgaatgttcagaag
ggtgaagcttctcttgaaagagttttagctattcttgatgctgatgtgaaaattgacgaa
gtacccaatcctgtttctatctcaacattaaagcattctatcgaatttaataatattggt
ttttattacgataaagatcatacgattcttaaaaacttctccctttctattccaaaaggg
aaaacggttgctcttgttgggcaaagtggaagtggtaaaacaacgattgccaatttatta
gcaagattttatgatgtttcggaaggagaaattctgattgacggaacagatatcaaacat
ttaaaactacaggaataccgtaagctattgggaatggtaacccaggaatctgtattattc
aatgattccgtttacaataatattctgatgggtaaacctgatgccaccagagaagaagtg
attgcagccgctaaaattgccaatgcagatgcatttatcaccacacttcctgaaggatat
gattccaatatcggagatgacggaggtaaactttccggaggtcagaaacaaagggtttct
attgccagagcggtattgaagaacccaccgatcatgattcttgatgaagcaacttcagct
ttggatacagaatccgaaagattcgtacaggatgcactggagaagatgatggaaaacaga
acttctttagtgattgcccaccgtctttcaaccattcagaaagcagactggattgtagtg
atggaaaaaggtgatatcgtagaacagggaacccaccacgacctgattgcaaaaagagga
atgtatcacaaacttgtcgaacttcaaaacttcgactaa
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