Chryseobacterium cucumeris: JNG87_06370
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Entry
JNG87_06370 CDS
T10197
Name
(GenBank) DEAD/DEAH box helicase
Organism
ccuc Chryseobacterium cucumeris
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SNF2_assoc
ResIII
MupG_N
Motif
Other DBs
NCBI-ProteinID:
QRA44374
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Position
1421652..1424993
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AA seq
1113 aa
AA seq
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MAEYILDNINISTLSVYDLLKHTSDSAFIGIRDFREIYPVAIENNTGIFTKESSLQNFPV
VTISKINSTLLCSCTCSNEKNQLCSHQAEIIHCIIEDKNYRLFFDETLRKKNFLPKAKEY
GLENEPDLDQYFELEYTEGKIKILPRIKEMLPADDVMLTRDLLPQLPSKLDELAVLESDK
KQILVIGKHRYYNHMTFSLMEAEITQTGKLKNPVTPVDAMQLIWKAEKPADIKFYTAITT
FQNNYNEDYNTAELEALKLIVQNPLELEVYYHDREIAETVSSKSLSFIELNTLDAEVQLS
VFKKDPFFEITGELLFNDIALPFKNIVLRNEYFVYNRNIFSFVDNPDMLRIIRFFKAHNE
ILLVHSSKYEAFMQDILSALEERIHINYSYIQPATKVQLEDKNYHTEKVIYLRQQENYIG
ITPVMKYGDVEVPVYSRKQLFDTDQNGNPFKIERNESAEARFTSLVMQQHPDFEEQMDGY
QYFYLHRDKFLDNNWFLEVFETWRNEGIIILGFNELKNNKLNPHRAKINIQITSGLDWFN
AKLKVGFGPKEASLKQLHRAIRNKSKFVQLDDGSMGILPEEWMEKIAAYFRAGEIDEELL
KIPKINFSEVTSLFEKEILSKEIQEELTSYSTKFSKVKNIPEVAVPAELNAELRDYQHDG
LNWLNFLDSFNFGGCLADDMGLGKTIQIIAFILSQREKRGHTTNLIVVPTSLLFNWQEEI
SRFAPSIKVLLHYGADRPKTTAHMPDYEVVLTTYGMLLSDIQFLKNFNFNYVFLDESQVI
KNPNSERYKAARLLQSRNRIVLTGTPVENSTFDLYSQLSFACPGLLGSKQYFKDIYAIPI
DKFEYSKRAVELQQKIKPFILRRTKKQVAKELPDKTETVIYCEMNTEQRKIYDAYEKELR
EFIAANDDDDLNKNSMHVLTGLTRLRQICNSPVLMKEGYSGENAVKIEILMEQILGKSKD
HKILVFSQFVGMLDLIKTELERHNIQFEYLTGQTKDRGEKVAHFQNNEDIRVFLISLKAG
GVGLNLTQADYIYLVDPWWNPAAENQAIDRSYRIGQTKNVIAVRMICSNTVEEKILTLQK
KKKELAQNLLTTDGKKLQGLSKQDLMNLLGSES
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatatattcttgacaacatcaatatcagtacactttccgtatatgacctgctg
aaacatacctcagacagcgcatttatcggaatcagggattttcgtgagatctatcctgtt
gctattgaaaacaatacaggaatatttacaaaagagtcttcattacagaattttccggta
gttaccatcagcaaaataaacagcactctgctttgttcatgcacttgcagcaatgaaaag
aaccagctttgttctcatcaggcagaaataatccactgcattattgaagataaaaactat
cgcctgttttttgatgaaacactccgcaaaaaaaactttcttcctaaagcaaaagaatat
gggctggaaaatgagccggatctggatcagtattttgaactggaatatactgaaggtaaa
attaaaatactgcccagaatcaaagaaatgcttcctgcagatgatgtgatgttgacaagg
gatcttcttcctcagcttccttctaaactggatgagctggcagtattggaatcggataaa
aagcaaatattggttatcggtaaacaccgttattacaatcatatgaccttctcactgatg
gaggcagaaataactcagacaggaaagctcaaaaatcccgtaactcctgtagatgccatg
cagcttatctggaaagcagaaaaacctgcagacatcaaattttatactgccattactact
tttcagaacaactataatgaagattacaatacggcagaactggaagctttaaagctcatt
gtacagaatcctctggagcttgaggtctattatcatgacagggaaatcgcagaaaccgtt
tcctcaaagtcactttcctttattgaattaaatactttagatgcggaggttcaattatct
gtatttaagaaagatccgttttttgaaatcaccggagagctgttgtttaatgacattgct
cttccatttaaaaatatagttctcagaaatgagtattttgtgtataaccgaaacattttc
agctttgtagacaatccggacatgctcagaatcatccggttctttaaggctcataatgaa
attttactggttcattcttcaaaatatgaagctttcatgcaggacattctgtctgcttta
gaagaacgtatccatattaattacagctacatacaacctgcaacgaaagtacagcttgaa
gacaagaattatcatactgaaaaagtcatttatctccgtcagcaggaaaattatatagga
attactcccgtcatgaaatacggtgatgtggaagttccggtctattccaggaagcagctt
tttgatacagatcagaatggaaatccgtttaaaatagaaagaaatgaatcagccgaagcc
cgctttacttctttggtgatgcagcagcatcctgattttgaggaacagatggacggctat
cagtatttttatcttcacagggataagttccttgataacaactggtttcttgaagtattt
gagacctggagaaacgaagggatcattatacttggctttaacgaattaaaaaacaataaa
ttaaaccctcaccgggcaaaaatcaatattcagattaccagcggactggattggtttaat
gctaagctgaaagtgggatttggtcccaaagaagcttctctgaaacagcttcaccgggcc
atccggaataagagtaaattcgtccagctggatgacggcagcatgggaattcttcccgaa
gagtggatggaaaagatagctgcttatttcagagcaggagaaattgatgaagagctttta
aagattccgaaaatcaatttttcggaggtaacgtcactgtttgaaaaagaaattctgagc
aaggagattcaggaagaacttacctcctattccacaaaattttcaaaagtaaaaaacatt
cctgaagtagctgttcccgctgaactgaatgctgaactgagggattatcagcatgacgga
ctgaactggcttaattttcttgacagtttcaacttcggaggatgtcttgcagatgatatg
ggacttggaaaaaccattcagatcattgcttttattctttcgcagagggaaaaaagaggc
cataccaccaacctgattgtggttcctacttccctgctcttcaactggcaggaagagatc
agcagatttgcaccttccataaaagttctgcttcattatggtgcagaccgaccgaaaaca
acagctcatatgcctgactatgaagtggttcttactacgtatgggatgctgctttcggac
attcaatttttgaaaaattttaatttcaattatgtatttctggatgaatcacaggtgatt
aaaaatcctaattcagaaagatacaaagccgcaagacttcttcaatcaagaaacagaatt
gttctgaccggaactcctgtcgaaaacagcacttttgatctttacagccagctttctttt
gcctgtcccggattattgggaagcaaacagtattttaaggatatttatgccattccaatt
gataaatttgagtacagcaaacgtgccgtggagcttcagcaaaagataaaaccattcatt
ctcagaagaaccaaaaagcaggttgctaaagaacttccggataaaacagaaacagtgatc
tactgtgaaatgaatacggaacagcgtaaaatttatgatgcttatgaaaaggagcttcgg
gaatttattgccgccaatgatgacgatgatctgaacaaaaacagcatgcacgtccttaca
gggcttacgaggctcagacagatctgtaattcccctgttctgatgaaggagggatattcc
ggagaaaatgccgttaaaatcgaaattctgatggagcaaatccttggaaaatccaaagat
cataaaatccttgttttctcacaatttgtaggcatgcttgatttgatcaagactgagctg
gaacgccacaatattcagtttgaatatttaacaggtcaaacgaaagacagaggtgaaaaa
gttgctcattttcagaacaatgaagatatccgtgtatttttgatcagcttaaaggccgga
ggtgtcggtctcaatcttacccaggcagattatatttatcttgttgacccatggtggaat
cctgcagctgaaaaccaggctattgaccgaagttaccgtataggacagaccaaaaatgta
attgcggtgaggatgatctgctccaatactgtagaagaaaagattcttacccttcaaaag
aagaaaaaagaactggctcagaatctgctgactacagatggaaagaaactccagggattg
tctaaacaggatttgatgaatttactgggatctgaatcgtaa
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