Chryseobacterium cucumeris: JNG87_08110
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Entry
JNG87_08110 CDS
T10197
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
ccuc Chryseobacterium cucumeris
Brite
KEGG Orthology (KO) [BR:
ccuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccuc03032
]
JNG87_08110
03036 Chromosome and associated proteins [BR:
ccuc03036
]
JNG87_08110
03400 DNA repair and recombination proteins [BR:
ccuc03400
]
JNG87_08110
DNA replication proteins [BR:
ccuc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JNG87_08110
Chromosome and associated proteins [BR:
ccuc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JNG87_08110
DNA repair and recombination proteins [BR:
ccuc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JNG87_08110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF4777
COMMD9_HN
DUF937
Motif
Other DBs
NCBI-ProteinID:
QRA44705
LinkDB
All DBs
Position
1822964..1823254
Genome browser
AA seq
96 aa
AA seq
DB search
MTKAELVNTISNKLGTEKNETQKVVEAFMQEIRTSMYNGDNVYLRGFGSFIIKTRAAKTG
RNISKNTAIEIPAHNIPAFKPSKSFVEKVKTKVAVK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggcagaattggtaaacaccatctcaaataagttgggaacagaaaagaatgaa
acacagaaagttgtagaagcttttatgcaggagatcagaacttctatgtataatggggat
aacgtttatctaagaggttttggatcttttatcattaaaacaagagctgctaaaacagga
agaaatatttctaaaaacactgcaattgagattcctgctcataacattcctgctttcaaa
ccttcaaaatcttttgttgagaaagtaaaaactaaagttgcagtaaaataa
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