Chryseobacterium cucumeris: JNG87_09710
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Entry
JNG87_09710 CDS
T10197
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ccuc Chryseobacterium cucumeris
Brite
KEGG Orthology (KO) [BR:
ccuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccuc03400
]
JNG87_09710
DNA repair and recombination proteins [BR:
ccuc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JNG87_09710
Archaeal homologous recombinant proteins
JNG87_09710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QRA44998
LinkDB
All DBs
Position
2144066..2147101
Genome browser
AA seq
1011 aa
AA seq
DB search
MIPVQLTIEGLYSYRERQTIDFRNLTEAGLFGIFGAVGSGKSSVLEAISFALYSETERLN
MRDKRAYNMMNLKSNSSYIEFDFINYENKLFRASRDFKRNSKKFEEVKPNAVTFYENING
KWIPLDHSNAEPIIGLSYSNFKRTIIIPQGQFKEFLELGAAERTNMMKEIFNLQKFDLQN
NVSVLNVKNRSELDQLEGQLKGFEEINEEKIRIQKEQLAEEQKKLSESNEKLEKVSQTYQ
QLKNLKSDFDSLQQNKEKFSKLSEEKPQMDALEMQAELYDRIFRIFNPLIIEKNKLSKEI
ASKRNEKEQQIKDWQETERAFNTVKEQLMTLEPQFKALEQSRIQENDLNLIIQILKFSEE
IKILNERTRKGSEKVKEVNLHKEKIQKTIDELSAQIKTLKEQKLDSALLSEVGNWFIQQK
NLKKSLQEQAEKIGKHQKQIGEITEELKPFAYTENYKEDFRIRKETLEAQKKELSQKLDH
LKIQKELSRFASELHDGENCPLCGSKEHPHIVEFHDVNTELQEIQEKIASLEQEATGLQK
QEAEIDKILDRKKIFEEQLFSEQKILLQIQKDIENHLLNFTWKQFASNQEEEFEKKRSDS
FTLEKKIEETERNIALARENFDRESKTLEKYKSALEAFRLEEVSKQEQINISRSGLKILE
WDLYAQKEIKEIEESYQKLAYSNKEIEENYLKTVEQEKILSPKLAEQKAIVSQSEKQITE
LEKEISGNEEAVVKALADQNFTEFKEVENILLQEINVELVRTKVQLFKVEFEALKKFIGE
LELKLKGLSFNNEQFSIAEQQFTEAQTEQKQISDSVVTKTAEIDRLEKEFVKKEELLKEL
AQLQKRSENLKIMMNLFKGAGFVQYVSSIYLRQLCDHANVRFHRMTRNQLSLQLNENNDF
EIIDYLNEGKSRSVKTLSGGQAFQVSLSLALALAESVQANAQADKNFFFIDEGFGTQDTE
SVNIVFETLTNLMKENRIVGIISHVEELKEKIPTALNIIKDEERGSLIEIV
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgatccctgttcaattaactatcgaaggactttactcgtaccgggaacgccagaccatt
gatttcagaaatctcactgaggcgggtctgtttgggattttcggagctgtgggttccgga
aaatcatcagttcttgaggccatttcgtttgctttatacagtgaaacggaacgtctgaat
atgcgcgataaaagggcttataacatgatgaatttaaaatcaaacagttcttatattgaa
tttgattttatcaattatgagaataaacttttccgtgcttcccgtgattttaagcgaaat
tcaaagaaatttgaagaagtaaagcctaacgcggttacattttatgaaaacatcaatggc
aaatggattcctttggatcactcgaatgcagaacctattattggattaagctattccaac
ttcaaaagaaccatcattattccgcagggacagttcaaagaattccttgaattgggcgct
gcagaaagaacgaacatgatgaaggaaatttttaaccttcagaaatttgacctccagaac
aatgtttctgtactcaatgtaaaaaacagatctgaactggatcagctggaaggacagtta
aaaggtttcgaagaaatcaatgaagagaagatccggattcaaaaagagcagcttgcagag
gaacaaaaaaagctctccgaatccaatgaaaaactggaaaaggtttcccagacctatcaa
cagctaaaaaacctgaaaagtgactttgacagtttacagcaaaacaaagaaaaattcagt
aaactctcagaagaaaagcctcagatggatgctctggaaatgcaggcagaattatacgac
aggattttcagaattttcaaccctttgattattgagaaaaataaactctcaaaagaaatt
gcttcaaaacgaaacgaaaaggagcagcaaatcaaagactggcaggaaactgaaagggct
tttaatactgtaaaagagcagctcatgactcttgaaccacagtttaaggcattagagcaa
tccagaattcaggaaaatgatctgaaccttattattcagatcctgaaattttctgaagaa
atcaagatcctgaacgaaagaacccggaaaggttctgaaaaagtaaaagaagtaaatctt
cataaagagaaaattcaaaagactattgatgagctttccgcacagattaaaaccttaaaa
gaacaaaaactggattctgccctgctttctgaagtgggcaactggtttattcagcaaaag
aatttaaaaaaatcgcttcaggaacaagctgaaaagatcgggaaacatcaaaagcagatc
ggagaaattacagaagaattaaagccttttgcttataccgaaaattataaagaagatttc
agaatcagaaaagaaaccttagaggctcaaaaaaaggaactttcccagaaactggatcat
ctcaaaatacaaaaagaactttcccgttttgccagtgaacttcatgacggagaaaactgc
ccgctctgtggttctaaagaacatccgcatattgtggaatttcatgatgtaaatactgaa
ctgcaggaaattcaggagaaaatagcatcgcttgaacaggaagcaacaggacttcaaaag
caggaggctgaaattgacaagattctggaccgtaaaaagatctttgaggaacagcttttt
tcggaacaaaaaatactgctgcagattcagaaggatattgaaaatcatctgctgaatttc
acctggaaacaatttgcttccaaccaggaagaggaatttgagaaaaaacgctcagactcg
tttacgctggagaaaaagattgaagaaacggaacggaatatcgctttagcaagggaaaat
tttgacagagaatccaaaacactggaaaaatataagagtgctcttgaagctttccgtctg
gaagaagtttcgaagcaggagcaaattaatatcagccgttccggtcttaaaattctcgaa
tgggatctgtatgctcaaaaggaaataaaagaaattgaagaatcatatcaaaagcttgct
tattctaataaagagattgaagagaattacctgaaaactgtagaacaggaaaaaattctt
tctccgaaactggcagagcaaaaggctattgtgagccaatctgaaaagcagattacagag
ctggagaaggaaatttcagggaatgaagaagcagttgtcaaagcattggctgatcaaaat
ttcacagaatttaaagaagttgagaatattttacttcaggaaattaatgttgagctggtg
aggactaaagttcagcttttcaaagttgaatttgaagctttaaagaaattcatcggagag
ctggagttaaaactgaaaggcctttcgttcaataacgaacagttttctatcgctgaacag
cagttcaccgaagcacaaaccgaacaaaagcagattagtgattctgtagtcacaaaaact
gctgaaatagatcgtctggaaaaggaatttgtaaaaaaagaggaacttctgaaagaactt
gcacaacttcaaaaacgctcagaaaatttaaaaatcatgatgaatctttttaaaggtgcg
ggttttgtacaatatgtttcatctatttatctgagacagctttgtgatcatgctaatgtg
cgttttcaccggatgaccagaaatcagctgagcctccagctgaatgagaataacgatttt
gaaattattgattacctcaacgaaggaaaaagcagaagtgtcaaaacactttccggaggc
caggcatttcaggtatctttaagtctggctctggctcttgcagaaagtgttcaggccaat
gcgcaggccgataaaaatttcttctttattgatgaaggttttggaactcaggatacggaa
tctgtgaatatcgtttttgaaacgctcaccaacctgatgaaagaaaacaggattgtagga
attatttcgcacgtggaagaactgaaagagaaaattcctacagcactcaatattattaaa
gacgaagaaagaggaagtctgattgagattgtttaa
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