KEGG   Chryseobacterium cucumeris: JNG87_10265
Entry
JNG87_10265       CDS       T10197                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ccuc  Chryseobacterium cucumeris
Pathway
ccuc00010  Glycolysis / Gluconeogenesis
ccuc00020  Citrate cycle (TCA cycle)
ccuc00260  Glycine, serine and threonine metabolism
ccuc00280  Valine, leucine and isoleucine degradation
ccuc00310  Lysine degradation
ccuc00380  Tryptophan metabolism
ccuc00620  Pyruvate metabolism
ccuc00630  Glyoxylate and dicarboxylate metabolism
ccuc00640  Propanoate metabolism
ccuc00670  One carbon pool by folate
ccuc00785  Lipoic acid metabolism
ccuc01100  Metabolic pathways
ccuc01110  Biosynthesis of secondary metabolites
ccuc01120  Microbial metabolism in diverse environments
ccuc01200  Carbon metabolism
ccuc01210  2-Oxocarboxylic acid metabolism
ccuc01240  Biosynthesis of cofactors
Module
ccuc_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ccuc_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ccuc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ccuc_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ccuc00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    JNG87_10265 (lpdA)
   00020 Citrate cycle (TCA cycle)
    JNG87_10265 (lpdA)
   00620 Pyruvate metabolism
    JNG87_10265 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    JNG87_10265 (lpdA)
   00640 Propanoate metabolism
    JNG87_10265 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    JNG87_10265 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    JNG87_10265 (lpdA)
   00310 Lysine degradation
    JNG87_10265 (lpdA)
   00380 Tryptophan metabolism
    JNG87_10265 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    JNG87_10265 (lpdA)
   00670 One carbon pool by folate
    JNG87_10265 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccuc04147]
    JNG87_10265 (lpdA)
Enzymes [BR:ccuc01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     JNG87_10265 (lpdA)
Exosome [BR:ccuc04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   JNG87_10265 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored Pyr_redox_3 GIDA NAD_binding_8 HI0933_like FAD_binding_3 FAD_binding_2 AlaDh_PNT_C 3HCDH_N Lys_Orn_oxgnase Lycopene_cycl Thi4 DAO UDPG_MGDP_dh_N Amino_oxidase 2-Hacid_dh_C NAD_Gly3P_dh_N
Other DBs
NCBI-ProteinID: QRA45104
LinkDB
Position
complement(2268014..2269414)
AA seq 466 aa
MDHYDIAVIGSGPGGYVAAIRSAQLGYKTVIIEKYDTLGGTCTNVGCIPTKALLDSTHHY
SEAKHQFNEHGIKLDHIELDFSQMYRRKADVVSKNTGGLDFLMSKNNITRLQGTAGFINN
STIRVVNGSEVKEITARYYIIATGSKPSTIPGVEIDKKRIITSTEALSLKEKPESMVIIG
GGVIGVEMASVFNRIGTKVTILEYADHLIAAMDHELGKSLQKILKKGGIDIRLNHAVYKT
ENTGSAAKVFFKDKNGTEGELEADYVLVAVGRSPYVKGLGLENTDVQQDERGFIKVDENS
RTSASNIYAIGDVIGGAMLAHKAEEEGVFVVETINGHKRPIHYNRIPSVVYTWPEVASVG
YTEDYLKQNNIAYNVGKFPFSASARARASMDMEGFAKVLVDPKYGEVLGVHIIGARAADL
IAQGVIAQEYEVTAEDMFRISYAHPTYSETLKEAYLIASGQGAINI
NT seq 1401 nt   +upstreamnt  +downstreamnt
atggatcattatgacattgccgtaatcggctcaggacccggcggatatgtagcggcgata
agaagcgcccagctgggatataaaaccgtgattatcgagaaatatgatacactgggagga
acatgtaccaatgtgggctgtattccgactaaagctttattagacagtacgcatcattat
tcagaagcaaagcatcaattcaatgaacatgggattaagctggatcatatagaactggac
ttttctcagatgtacagaagaaaagcagatgtagtttcaaaaaatacaggaggtctggat
tttttaatgagtaaaaataatattacaagactacagggaacggctggatttatcaataat
tctaccatcagagttgtaaacggatctgaagttaaagaaataacggcccgatattatatc
attgctacaggttcgaaaccatccactattcccggagtggaaattgataaaaaaagaatt
attacttccacagaagcattatcattaaaggaaaaacctgaatctatggtgattatcggc
gggggagtaatcggggtggaaatggcttctgttttcaaccgcatcggaacgaaagtgact
atccttgaatatgctgatcatctgatcgctgctatggatcatgaattggggaaaagcctt
cagaaaatcctgaaaaaaggaggaattgatatccgccttaatcatgcagtgtataaaacc
gagaataccggatctgctgctaaagtgttttttaaagataaaaacggaacagaaggtgag
ctggaagcagattatgtattggtagcggtgggaagaagcccttatgtaaaaggtcttggt
cttgaaaatactgatgtacagcaggatgagagaggatttattaaagtggatgaaaacagc
cggacttccgcatccaatatctatgcgattggtgatgttattggtggtgcaatgctggct
cacaaagctgaggaagaaggtgtttttgtagttgaaaccattaacgggcacaaacgaccc
attcactataaccgtattccttcagtggtgtatacctggcctgaagtagcttcagtaggc
tacaccgaagattacctgaaacaaaataacattgcatacaatgtagggaaatttccattt
tctgccagtgcaagggcccgcgcttcaatggatatggaaggttttgcgaaagttttggtg
gatccgaaatatggcgaagtgctgggagttcacatcattggagccagagctgccgatctg
attgcacagggtgtcatagctcaggagtatgaagtaactgctgaagatatgttccgtatt
tcttatgctcatccaacctattctgaaacattgaaggaagcttacctgattgcatctggg
cagggagctattaatatataa

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