Chryseobacterium cucumeris: JNG87_10595
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Entry
JNG87_10595 CDS
T10197
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ccuc Chryseobacterium cucumeris
Pathway
ccuc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccuc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JNG87_10595 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccuc03019
]
JNG87_10595 (rny)
Messenger RNA biogenesis [BR:
ccuc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JNG87_10595 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
AAA_15
KH_2
EIF4E-T
UPF0154
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QRA45167
LinkDB
All DBs
Position
complement(2343984..2345549)
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AA seq
521 aa
AA seq
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MIEVIVGVVCLVIGAVVGMFFSRSSLNTKAKFIIDDAKKNAENLIEKANVQAESIKKEKN
LQAKEKFLELKSQHDADIQSREKKMQEVEKRIKDKEHKLNDELSKTGKLEKDLDRQIADY
AKKNEILDRKQQELDTATAKKVEILEKISNYTAEEAKAELVETMRAEAKTRAQAHVQSIM
EEAQMNAKNEARKIVIQTIQRIGTEQAIENSVSVFNIESDEVKGRIIGREGRNIRALEAV
TGVEIIVDDTPEAILLSCFDPVRREIARLSLHRLVTDGRIHPARIEEVVEKTRKQIEEEI
IEVGKRTIIDLGIHGLHPELIKIVGRMKYRSSYGQNLLQHSREVANIAATMAAELGLNVK
LAKRAGLLHDIGKVPEQESELPHALLGMQWAEKYGENPEVVNAIGAHHDEIEMKSLLSPI
IQVADAISGARPGARRQVLESYIQRLKDLESAALSFDGVSSAYAIQAGRELRVMVESGKV
NDEVASQLSYDISEKIQNELTYPGQVKVTVIRETRAVNIAR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagttatagtcggtgttgtttgtttggtaatcggagctgtcgtgggaatgttt
ttttccagaagttctctgaatactaaagcaaaattcatcatagatgatgccaagaaaaat
gccgaaaaccttatagaaaaagctaatgtacaggctgaatccataaagaaagaaaagaat
cttcaggctaaagaaaaattcctggaactgaaatcacagcatgacgctgatattcagtcc
cgcgaaaagaaaatgcaggaagttgagaaaagaatcaaagacaaggaacacaagctgaat
gacgagcttagcaagactgggaagcttgaaaaagatctcgacagacagattgcagattat
gccaagaagaacgaaattctggatagaaaacagcaggaattagatacggctactgccaag
aaagtagaaatacttgaaaaaatctctaattacaccgctgaggaagctaaagcagaattg
gtagaaaccatgagagcagaggccaaaacaagagcacaggcacatgttcagagcatcatg
gaagaagctcagatgaatgctaaaaacgaagcgagaaagattgttatccagacaatccag
agaatcggaacggagcaggcaatcgaaaattcagtatccgttttcaacatcgagtctgat
gaagtaaaaggtagaattatcggtagagaaggtagaaatatccgtgctttggaagcggta
accggagtagaaattatcgttgatgatactcctgaagctattcttctttcatgctttgat
ccggtaagaagagaaattgcaagactatccctacacagattggtaaccgatggtagaatt
cacccggcaagaatcgaagaagtggtagaaaaaacaagaaagcagattgaggaggaaatc
attgaagtagggaagagaaccatcattgatttaggaatccacggattacaccctgaactg
atcaaaatcgtaggtagaatgaaataccgttcttcttacggacaaaacttactacagcac
tcaagagaagtagccaacattgctgcaacgatggctgctgaattaggattaaacgtaaaa
ttagcaaaaagagcaggtcttttacacgatatcggtaaagttcctgagcaggaatcagaa
ttaccacacgcgcttttaggaatgcagtgggctgagaaatatggtgaaaaccctgaagtt
gtaaacgcaatcggagctcaccacgacgaaattgaaatgaagtcattattatctccgatc
attcaggttgccgatgcgatctcaggagcaagaccgggagcaagaagacaggtattggag
tcttacatccagagattaaaagatcttgaatctgcagcattaagcttcgatggagtatcc
agtgcttatgcaattcaggcaggtagagaactgagagtaatggtagagagtggaaaagta
aatgacgaagtagcttctcagctttcttacgacatctctgagaaaatccagaatgaactg
acttatccgggacaggtaaaagtaacagtaatcagagaaacgagagctgtcaatattgcc
agataa
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