KEGG   Chryseobacterium cucumeris: JNG87_10595
Entry
JNG87_10595       CDS       T10197                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
ccuc  Chryseobacterium cucumeris
Pathway
ccuc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ccuc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    JNG87_10595 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccuc03019]
    JNG87_10595 (rny)
Messenger RNA biogenesis [BR:ccuc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     JNG87_10595 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B AAA_15 KH_2 EIF4E-T UPF0154 KH-I_KHDC4-BBP
Other DBs
NCBI-ProteinID: QRA45167
LinkDB
Position
complement(2343984..2345549)
AA seq 521 aa
MIEVIVGVVCLVIGAVVGMFFSRSSLNTKAKFIIDDAKKNAENLIEKANVQAESIKKEKN
LQAKEKFLELKSQHDADIQSREKKMQEVEKRIKDKEHKLNDELSKTGKLEKDLDRQIADY
AKKNEILDRKQQELDTATAKKVEILEKISNYTAEEAKAELVETMRAEAKTRAQAHVQSIM
EEAQMNAKNEARKIVIQTIQRIGTEQAIENSVSVFNIESDEVKGRIIGREGRNIRALEAV
TGVEIIVDDTPEAILLSCFDPVRREIARLSLHRLVTDGRIHPARIEEVVEKTRKQIEEEI
IEVGKRTIIDLGIHGLHPELIKIVGRMKYRSSYGQNLLQHSREVANIAATMAAELGLNVK
LAKRAGLLHDIGKVPEQESELPHALLGMQWAEKYGENPEVVNAIGAHHDEIEMKSLLSPI
IQVADAISGARPGARRQVLESYIQRLKDLESAALSFDGVSSAYAIQAGRELRVMVESGKV
NDEVASQLSYDISEKIQNELTYPGQVKVTVIRETRAVNIAR
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgatagaagttatagtcggtgttgtttgtttggtaatcggagctgtcgtgggaatgttt
ttttccagaagttctctgaatactaaagcaaaattcatcatagatgatgccaagaaaaat
gccgaaaaccttatagaaaaagctaatgtacaggctgaatccataaagaaagaaaagaat
cttcaggctaaagaaaaattcctggaactgaaatcacagcatgacgctgatattcagtcc
cgcgaaaagaaaatgcaggaagttgagaaaagaatcaaagacaaggaacacaagctgaat
gacgagcttagcaagactgggaagcttgaaaaagatctcgacagacagattgcagattat
gccaagaagaacgaaattctggatagaaaacagcaggaattagatacggctactgccaag
aaagtagaaatacttgaaaaaatctctaattacaccgctgaggaagctaaagcagaattg
gtagaaaccatgagagcagaggccaaaacaagagcacaggcacatgttcagagcatcatg
gaagaagctcagatgaatgctaaaaacgaagcgagaaagattgttatccagacaatccag
agaatcggaacggagcaggcaatcgaaaattcagtatccgttttcaacatcgagtctgat
gaagtaaaaggtagaattatcggtagagaaggtagaaatatccgtgctttggaagcggta
accggagtagaaattatcgttgatgatactcctgaagctattcttctttcatgctttgat
ccggtaagaagagaaattgcaagactatccctacacagattggtaaccgatggtagaatt
cacccggcaagaatcgaagaagtggtagaaaaaacaagaaagcagattgaggaggaaatc
attgaagtagggaagagaaccatcattgatttaggaatccacggattacaccctgaactg
atcaaaatcgtaggtagaatgaaataccgttcttcttacggacaaaacttactacagcac
tcaagagaagtagccaacattgctgcaacgatggctgctgaattaggattaaacgtaaaa
ttagcaaaaagagcaggtcttttacacgatatcggtaaagttcctgagcaggaatcagaa
ttaccacacgcgcttttaggaatgcagtgggctgagaaatatggtgaaaaccctgaagtt
gtaaacgcaatcggagctcaccacgacgaaattgaaatgaagtcattattatctccgatc
attcaggttgccgatgcgatctcaggagcaagaccgggagcaagaagacaggtattggag
tcttacatccagagattaaaagatcttgaatctgcagcattaagcttcgatggagtatcc
agtgcttatgcaattcaggcaggtagagaactgagagtaatggtagagagtggaaaagta
aatgacgaagtagcttctcagctttcttacgacatctctgagaaaatccagaatgaactg
acttatccgggacaggtaaaagtaacagtaatcagagaaacgagagctgtcaatattgcc
agataa

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