Chryseobacterium cucumeris: JNG87_10685
Help
Entry
JNG87_10685 CDS
T10197
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ccuc Chryseobacterium cucumeris
Brite
KEGG Orthology (KO) [BR:
ccuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccuc03032
]
JNG87_10685 (gyrB)
03400 DNA repair and recombination proteins [BR:
ccuc03400
]
JNG87_10685 (gyrB)
Enzymes [BR:
ccuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JNG87_10685 (gyrB)
DNA replication proteins [BR:
ccuc03032
]
Prokaryotic type
DNA Topoisomerases
JNG87_10685 (gyrB)
DNA repair and recombination proteins [BR:
ccuc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JNG87_10685 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QRA45183
LinkDB
All DBs
Position
complement(2366034..2367968)
Genome browser
AA seq
644 aa
AA seq
DB search
MSQKQYTASSIQALEGMEHVRMRPSMYIGDVGVRGLHHLVYEVVDNSIDEALAGYCDTIF
VSIKEGNGIEVSDNGRGIPVDFHEKEQKSALEVVMTKIGAGGKFDKDSYKVSGGLHGVGV
SCVNALSNEMITTVYRDGNVYQQIYSRGKAQTGVEEIGHSEKRGTKQFFQPDDSIFTELI
YNYDTLASRLRELSYLNKGITITLTDEREKLEDGSFRSEVFHSEGGLKEFVAYIDGNRES
IMEHVIFMEGERDDIPVEVAMRYNTSFNENLHSYVNNINTHEGGTHLAGFRRALTRTLKK
YADDLGIPQKEKVEVTGDDFREGLTAVVSVKVMEPQFEGQTKTKLGNSEVSGAVDKIVGE
MLTNFLEENPNEAKLIVQKVVLAAKARQAAKKAREMVQRKSPMGGSGLPGKLSDCSSKDP
AESEIFLVEGDSAGGTAKQGRDRHFQAILPLRGKILNVEKSMLHKVYDNEEIRNIYTALG
VSVGTEEDSKALNLAKLRYHKIVIMTDADIDGSHISTLILTFFFRYMKELIENGYIYIAQ
PPLYLLKKGNKKVYAYNEKEREEFTLEMSPDGKGVEVQRYKGLGEMNPEQLWETTLNPEH
RILKQVTIDNAVEADSIFSMLMGDEVPPRREFIEKNAKYAKIDA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaaacaatatacagctagtagtattcaggcattggaaggaatggaacacgtt
cgtatgcgtccttcaatgtacattggtgatgtaggagtcagaggacttcaccacttggtt
tatgaagtagtagataactctattgacgaggcattggcagggtactgcgacacgatcttc
gttagcatcaaggaaggaaacggaattgaagtaagtgataacggtagaggtatcccggtt
gatttccacgaaaaagagcagaaatctgcccttgaagtggtaatgacaaaaattggagcc
ggaggtaagtttgacaaagactcttataaggtttcaggaggtcttcacggggttggggtt
tcgtgtgtgaatgctctttccaacgagatgatcactacggtttacagagacggaaacgtt
taccagcagatttattcaagaggaaaagcccagacaggtgttgaggagattggtcacagc
gaaaaaagaggaaccaagcagtttttccagccggatgatagtatatttacagagttaatt
tataattacgatacattagcaagccgtttaagagaactttcttaccttaacaaaggaatt
accattacattaactgatgaaagagagaaattagaagacggatctttccgttcggaagtt
ttccattcagaaggtgggttaaaagaattcgttgcttacattgatggtaaccgtgagtct
atcatggaacatgtaatcttcatggaaggagaaagagatgatattcctgtagaagtagca
atgcgttacaatacttctttcaacgaaaatcttcactcttacgtaaacaacatcaacact
catgaaggaggaactcaccttgcaggtttcagacgtgctttgacgagaacccttaaaaaa
tatgctgatgatctgggtattccacagaaagagaaagtagaagttacaggtgatgatttc
cgtgagggattaacagctgtagtttctgtaaaagtaatggaacctcagtttgaaggacag
actaaaacaaaattaggaaactctgaagtttccggagctgtagataaaattgtaggggaa
atgcttaccaacttcctggaagaaaatcctaatgaagctaagctgattgttcagaaagtt
gttttagctgcaaaagcaagacaggctgcaaaaaaagcccgtgaaatggttcagagaaaa
tctccgatgggaggttccggtcttccagggaaattatcagactgttcatcaaaagatccg
gcagaatctgaaatcttccttgtagagggagattccgcagggggtacggctaaacaggga
agagacagacacttccaggctatccttccgttaagaggtaaaattctgaacgtagagaaa
tctatgcttcacaaagtatatgataacgaagagatcagaaatatctatactgctcttggg
gtttctgtaggtactgaggaagacagcaaagcattgaacctggcaaaattaagataccac
aagatcgttatcatgaccgatgccgatattgacggatctcacatttcaacactgattctt
actttcttcttcagatatatgaaggaacttattgagaatggttatatctatatcgctcaa
ccgcctttataccttttaaagaaaggaaataaaaaagtgtatgcttataacgaaaaagag
cgtgaggaatttactttagaaatgtctccggacggaaaaggagtagaggtacaacgttac
aaaggtcttggagagatgaaccctgaacagttgtgggaaactacattgaatcctgaacac
agaattctgaagcaggtaaccattgataatgcagtggaagcagacagtattttctcaatg
ctgatgggagatgaagttccgccaagaagagaatttatcgagaaaaatgcgaaatatgca
aaaattgatgcataa
DBGET
integrated database retrieval system
