Chryseobacterium cucumeris: JNG87_11165
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Entry
JNG87_11165 CDS
T10197
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ccuc Chryseobacterium cucumeris
Brite
KEGG Orthology (KO) [BR:
ccuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccuc03016
]
JNG87_11165 (truB)
Enzymes [BR:
ccuc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JNG87_11165 (truB)
Transfer RNA biogenesis [BR:
ccuc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JNG87_11165 (truB)
Prokaryotic type
JNG87_11165 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QRA41201
LinkDB
All DBs
Position
complement(2468712..2469410)
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AA seq
232 aa
AA seq
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MTAEELKSGYIFLLDKPLDWTSFQAVNKMKYKLKREFDLPKKFKIGHAGTLDPRATGLLI
VCCGKFTKKIPEIQDAPKEYWTEIKIGVQTESYDTEKPEILHQDISHITEEQVKEVLEKF
VGEIEQKPPVYSAIKIDGERAYNLARAGEEVEMKARKTTIHYIKDIKIDFPLVSFMVGCS
KGTYIRSLAHDIGQELGVGAYLTQLRRTKIGDYAIEDATDQFLNNEYRFESL
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgaagaactgaaatcaggatacatttttttattggacaaacctttggactgg
acttccttccaggctgtcaataaaatgaaatataaacttaaaagggaatttgatcttccc
aagaaatttaaaatcggacacgccggaactttagatcccagagcaaccgggcttcttatc
gtctgctgtggaaaatttacaaagaaaattcctgaaattcaggatgctcccaaagaatat
tggacagagatcaagatcggtgtccagacagaatcctatgataccgaaaaacctgaaatt
cttcaccaggatatctctcatattactgaagaacaggtaaaagaagtgctggaaaaattt
gttggggaaattgaacagaaaccacccgtttattcagcgattaaaattgatggcgaaaga
gcttacaatcttgccagagcaggtgaagaagtggaaatgaaggcaagaaaaacaaccatc
cattatatcaaagacataaaaatcgattttcctttggtgagtttcatggtaggctgttca
aaaggaacatacatcagaagtctggctcatgatatcgggcaggaactgggagtaggagct
tatctgacacagctgagacgtaccaaaattggtgattatgccattgaagatgctacagat
cagttcctgaataacgagtacagattcgaaagcctatga
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