Chryseobacterium cucumeris: JNG87_12995
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Entry
JNG87_12995 CDS
T10197
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ccuc Chryseobacterium cucumeris
Pathway
ccuc00010
Glycolysis / Gluconeogenesis
ccuc00020
Citrate cycle (TCA cycle)
ccuc00260
Glycine, serine and threonine metabolism
ccuc00280
Valine, leucine and isoleucine degradation
ccuc00310
Lysine degradation
ccuc00380
Tryptophan metabolism
ccuc00620
Pyruvate metabolism
ccuc00630
Glyoxylate and dicarboxylate metabolism
ccuc00640
Propanoate metabolism
ccuc00670
One carbon pool by folate
ccuc00785
Lipoic acid metabolism
ccuc01100
Metabolic pathways
ccuc01110
Biosynthesis of secondary metabolites
ccuc01120
Microbial metabolism in diverse environments
ccuc01200
Carbon metabolism
ccuc01210
2-Oxocarboxylic acid metabolism
ccuc01240
Biosynthesis of cofactors
Module
ccuc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ccuc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ccuc_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
ccuc_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ccuc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
JNG87_12995 (lpdA)
00020 Citrate cycle (TCA cycle)
JNG87_12995 (lpdA)
00620 Pyruvate metabolism
JNG87_12995 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
JNG87_12995 (lpdA)
00640 Propanoate metabolism
JNG87_12995 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JNG87_12995 (lpdA)
00280 Valine, leucine and isoleucine degradation
JNG87_12995 (lpdA)
00310 Lysine degradation
JNG87_12995 (lpdA)
00380 Tryptophan metabolism
JNG87_12995 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JNG87_12995 (lpdA)
00670 One carbon pool by folate
JNG87_12995 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccuc04147
]
JNG87_12995 (lpdA)
Enzymes [BR:
ccuc01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
JNG87_12995 (lpdA)
Exosome [BR:
ccuc04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
JNG87_12995 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
FAD_binding_2
GIDA
NAD_binding_8
HI0933_like
FAD_binding_3
AlaDh_PNT_C
DAO
Lys_Orn_oxgnase
Thi4
3HCDH_N
IFT46_B_C
TbsP_N
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
QRA41537
LinkDB
All DBs
Position
2893576..2894979
Genome browser
AA seq
467 aa
AA seq
DB search
MSQFDVTVIGSGPGGYVAAIRAAQLGFKTAIIEKYSTLGGTCLNVGCIPSKALLDSSEHF
ENAKHNFAGHGIIINEPQADIARMIERKNEVIKQNTDGISYLMNKNQITVFEGVGSFESA
TQIKVTKNDGSSETIESKYTIIATGSKPSTLPFISLDKERVITSTEALNLKEIPKHLVVI
GGGVIGLELGSVYLRLGAQVTVVEFMDKIIPGMDGALSKELTKVLKKQGMKFMLSTAVSA
VERNGDTVKITAKDKKGEEVVVEGDYCLVSVGRKPYTDGLGLEKAGVELDERGRVKVNDH
LQTNVANIYAIGDVIKGAMLAHKAEEEGVFVAETLAGQKPHINYNLIPGVVYTWPEVAGV
GKTEEQLKEEGVAYKVGSFPMRALGRSRASGDIDGLVKIIADEKTDEVLGMHIVGARAAD
LIAEGVIAMEFRASAEDIARSSHAHPTYAEAIKEAALDATAKRPIHM
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaattcgatgttaccgtaataggttctggtcccggtggttatgttgctgctatc
cgtgcagcacagttaggtttcaaaacagcaattattgaaaaatattcaactttaggcgga
acttgtcttaacgttggatgtattccgtcaaaagcgcttcttgacagctctgagcatttc
gaaaatgcaaaacacaattttgcaggtcacggaatcatcatcaacgagccgcaagcggat
attgccagaatgatcgaacgtaaaaacgaagtgatcaagcagaatactgacggaatcagc
tacctgatgaacaaaaatcagattactgtttttgaaggagtaggaagcttcgaatctgct
actcagattaaagtgactaaaaatgacggttcttcggaaacgatcgagtctaaatatacc
atcattgcaacaggttctaaaccatctacactgcctttcatctctttagacaaagaaaga
gtgattacttctacggaagctttaaaccttaaagaaattcctaagcatttagtagtaatc
ggaggtggagttatcggtcttgaactaggttcggtatacttaagattaggagcacaggta
actgttgttgaatttatggataaaatcatccctggaatggatggagctttaagcaaagaa
ttgactaaagttcttaaaaaacaaggaatgaagtttatgctttccactgcggtttctgca
gttgaaagaaacggagatactgtaaagatcacggctaaagataaaaaaggtgaagaagta
gttgtagaaggagattactgtttggtttctgtaggtagaaaaccttatacagacggtctt
ggtcttgaaaaagcaggtgtagagcttgacgaaagaggaagagtaaaagtaaacgatcac
ctgcagactaatgttgctaatatctatgcgatcggtgacgttatcaaaggagctatgctt
gctcacaaagctgaagaagaaggagttttcgttgctgaaacattggcaggacaaaaacct
cacatcaactataacctgattcctggtgttgtgtacacatggccggaagttgctggagtt
ggtaaaactgaagagcagctaaaagaagaaggtgttgcttacaaagtaggatctttcccg
atgagagctttaggtagaagccgtgcaagtggtgatattgacggtcttgtgaagattatt
gcagacgaaaaaactgatgaggttttagggatgcacatcgtaggagcaagagctgctgac
cttattgcagaaggggtaattgctatggaattccgtgcaagcgctgaagacatcgcaaga
agttctcacgctcacccaacctatgcagaagctatcaaagaagctgcattggatgctaca
gcaaaaagacctattcatatgtaa
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