Chryseobacterium cucumeris: JNG87_14455
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Entry
JNG87_14455 CDS
T10197
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ccuc Chryseobacterium cucumeris
Brite
KEGG Orthology (KO) [BR:
ccuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccuc03032
]
JNG87_14455
03400 DNA repair and recombination proteins [BR:
ccuc03400
]
JNG87_14455
Enzymes [BR:
ccuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JNG87_14455
DNA replication proteins [BR:
ccuc03032
]
Prokaryotic type
DNA Topoisomerases
JNG87_14455
DNA repair and recombination proteins [BR:
ccuc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JNG87_14455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QRA41821
LinkDB
All DBs
Position
complement(3220956..3222062)
Genome browser
AA seq
368 aa
AA seq
DB search
MEKNTDLEIISHLKPSKIVKIMKDPEASAKAVHLVYTTDAETAGITRKKTGKKYSYYKDG
EKIKDKDEITRINKLVIPPAWENVWICALDNGHLQATGFDVKKRKQYRYHPLWSALRNHT
KFYRMLQFGYALPDIRLHIEQDLALRNFEKRKILALIVSLMQRTNIRIGNNVYEKLYGSF
GLTTLKDKHVKVKGQKISFSFKGKKGVMHQIDLRSPRLARLIQKCKDIPGKELFQYFDDE
GNRHSVDSGMVNDYIKEISGEDFTAKDFRTWSGTVSALIAFKEIGYAENDTEYKKKVKEA
LDIVAENLGNTSAVCRKYYVHPLVINLYENNTIKKYLDELEVIEENDGKADLTKEERLVL
KILENERM
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaatacagatttggagatcatttctcaccttaagccttcaaaaattgttaaa
ataatgaaggatccggaagcttctgcaaaggcggtacatctcgtatataccaccgatgcg
gaaaccgccggaattacccgtaagaaaaccgggaagaaatactcctattataaagacgga
gaaaaaataaaggataaagacgaaattacccggatcaataaactggtgattccgcctgcg
tgggaaaatgtatggatctgtgctcttgacaatggccatcttcaggccacgggtttcgat
gtaaaaaaaagaaaacagtaccgctaccaccctctgtggagtgctttaagaaatcataca
aaattttacagaatgcttcagttcggatatgcattaccggacatccgtctgcatatagaa
caggatcttgccctgagaaattttgagaaacgaaaaatccttgccttaattgtaagcctt
atgcaaagaaccaatatccgtatcgggaataacgtatatgaaaaattatacggttctttt
ggtctgaccacattaaaggataaacatgtaaaggtaaaaggacaaaaaatttctttttct
tttaaagggaagaaaggtgtcatgcatcaaatcgacctcaggagtccaaggctggcaagg
cttattcagaaatgcaaggatattcccgggaaagagctttttcagtattttgatgatgaa
ggaaaccgccattccgtcgattccgggatggtgaacgactatattaaagagatcagtggt
gaagattttaccgctaaggatttcagaacatggtccggaaccgtaagtgctctgatcgct
tttaaagaaatcgggtatgcggaaaatgacactgaatataaaaagaaggtaaaagaagcc
ctggacatcgtggcagaaaacctgggaaatacatcggctgtctgcagaaagtattatgtt
catcctttagtcatcaacctttacgagaataatacgatcaaaaaatatcttgacgaactg
gaagtcatagaagaaaatgacggaaaagcagatctgacgaaagaggaaaggctggttttg
aaaattctggaaaacgagagaatgtag
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