Campylobacter cuniculorum: CCUN_0641
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Entry
CCUN_0641 CDS
T05046
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ccun
Campylobacter cuniculorum
Pathway
ccun03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccun00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CCUN_0641 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccun03021
]
CCUN_0641 (rpoC)
03400 DNA repair and recombination proteins [BR:
ccun03400
]
CCUN_0641 (rpoC)
Enzymes [BR:
ccun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CCUN_0641 (rpoC)
Transcription machinery [BR:
ccun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CCUN_0641 (rpoC)
DNA repair and recombination proteins [BR:
ccun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CCUN_0641 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
ARJ56266
UniProt:
A0A1W6BVX6
LinkDB
All DBs
Position
628449..632999
Genome browser
AA seq
1516 aa
AA seq
DB search
MSKFKIIEIKEETRPRDFEAFQLRLASPEKIKSWSYGEVKKPETINYRTLKPERDGLFCA
KIFGPIRDYECLCGKYKKMRFKGVKCEKCGVEVANSKVRRSRMGHIELVTPVAHIWYVNS
LPSRIGTLLGVKMKDLERVLYYEAYIVESPGDAYYDNENTKKVEFCDVLNEEQYQSLIQR
YENSGFKARMGGEVVRDLLANLDLVSLLNQLKTEMQATSSEAKKKTIIKRLRVVENFLNS
NLNADINSDEAVPNRPEWMMITNLPVLPPDLRPLVALDGGKFAVSDVNDLYRRVINRNTR
LKKLIELDAPEIIIRNEKRMLQEAVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRF
RQNLLGKRVDFSGRSVIVVGPKLRMDQCGLPKKMALELFKPHLLAKLEEKGYATTVKQAK
KMIENKTNEVWECLEEVVKGHPVMLNRAPTLHKLSIQAFHPVLVEGKAIQLHPLVCAAFN
ADFDGDQMAVHVPLSQEAIAECKVLMLSSMNILLPASGKSVAVPSQDMVLGIYYLSLEKI
GAKGAHKICTGIDEVMMALEAKCLDIHASIQTIVDGRKITTTAGRLIIKSILPDFVPEHS
WNKILKKKDIAALVDYVYKQGGLQITASFLDKLKNLGFEYATKAGISISIADIIVPNDKQ
KAIDSAKKQVREIQNSYNLGLITSIERYNKIIDIWKSTNNILSKGMMNLIEKDKEGFNSI
YMMADSGARGSAAQISQLAAMRGLMTKPDGSIIETPIISNFREGLNVLEYFISTHGARKG
LADTALKTANAGYLTRKLIDVAQNVKITIEDCGTHEGVEINEITADSSIIETLEERILGR
ILAEDVIDPITNSVIFTEGTLIDEEKARILTESGVKSVNIRTPIICKAKKGICAKCYGIN
LSEGKLVRPGEAVGIISAQSIGEPGTQLTLRTFHSGGAASTDLQDRQVSAQKEGFIRFYN
LKTYKNKEGKNIVANRRNAAILLVEPKIKAPFKGVISVESIHEDIIVCIRNKEQESKFIL
RKYDLAKPNELAGVSGSIDGKFYLPYQNGSEVNENESIVEVIKEGWNIPNRIPFASEILV
KDGDPVVQNIKAGEKGTLKFYILKGDGLDRVRNIKKGDIVKEKGFFVVIADENDREAKRH
YIPRESKIEFNDSTYIDDPNTIIASASKKEKTIIGEWDAYNNTIIAEISGVVSFEDIEAG
YSADEQIDEATGRRSLVINEYLPSGVRPTLLVAGKDDKVVRYQLEPKTVIFVQDGSKVEQ
ADILAKTPKAVAKSKDITGGLPRVSELFEARKPKNAAVIAEIDGVVHFDKPLRSKERIII
QAEDGASVEYLIDKSKHIQVRDGEFIHAGEKLTDGVVSSHDVLKILGEKALHHYLISEIQ
QVYRGQGVVISDKHIEVIVSQMLRQVRVVDSGNTKFIEGDLISRRKFIEENERILRMGGE
PAIAEPVLLGVTRAAIGSDSVISAASFQETTKVLTEASIAGKFDYLEDLKENVILGRIIP
VGTGLYSEQKFKIKEQ
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatttaaaatcatagaaatcaaagaagaaacaagacctagagattttgaggct
tttcaattaagacttgcaagtcctgaaaaaatcaaatcttggtcttatggagaggtaaaa
aagcctgaaacaatcaattatagaaccttaaaaccagaaagagatggattattttgtgcg
aaaatttttggaccgattcgcgattatgaatgcctttgcggaaaatataaaaaaatgcgt
tttaaaggcgttaaatgtgaaaaatgcggagttgaagttgcaaattctaaggtacgtcgc
tcaagaatggggcatattgagcttgtaacacctgtagcacatatttggtatgttaattct
ttaccaagtcgtattggcacacttttgggtgtgaagatgaaagacttagagagagtgctt
tattatgaagcttatattgttgaaagccccggagatgcgtattatgataatgaaaatact
aaaaaagttgaattttgcgatgttttaaacgaagagcaatatcaaagcttgatacaacgt
tatgaaaatagcggttttaaagccagaatgggcggtgaagttgttcgtgatttgcttgca
aatttagatcttgtttctcttttaaatcagcttaaaactgaaatgcaagccacaagctct
gaagcaaagaaaaagactattattaaaagacttagagtggttgaaaattttcttaatagc
aatttaaatgccgatattaacagcgatgaagccgttccaaatcgtcctgaatggatgatg
ataactaatttaccggtattaccgcctgatttgcgtcctttggttgctttagatggagga
aaattcgcggtttctgatgtgaatgatttatatcgtagggttattaatcgcaatacaagg
cttaaaaaacttatagaacttgatgctccagagattattataagaaatgaaaaaagaatg
cttcaagaagctgtcgatgctttatttgacaatggacgtagggctaatgctgttaaaggt
gctaataaaagacctctaaaatccttaagtgaaatcattaaaggaaaacaaggacgtttc
agacaaaatttgctcggtaaaagagtggatttttcaggtcgtagtgttattgttgtggga
ccaaaacttagaatggatcaatgtggtttgcctaaaaaaatggctttagagcttttcaaa
ccacatcttttagcaaagcttgaagaaaagggttatgcaaccacagtaaaacaagctaaa
aaaatgatagaaaataaaactaatgaagtttgggaatgccttgaagaagtggttaaggga
catcctgttatgctcaaccgtgccccaaccttgcataaactttctatacaagcctttcat
cctgttttggttgaaggtaaggcaatacaacttcatcctttggtttgtgcagcatttaat
gcggattttgacggagaccaaatggcagttcatgttcctctttctcaagaggctattgca
gaatgcaaagttttaatgctttcttcaatgaatatcttattgcctgcaagtggaaaatct
gttgctgtgccttctcaagatatggttttaggaatttattatctttctttggaaaaaatt
ggagctaagggagcacataaaatttgcacgggcattgatgaagtgatgatggctttagaa
gcaaaatgtttagatatccatgcaagcatacaaacaatagtcgatggacgcaaaattaca
accactgcgggacgcttaatcattaaatccatattacctgattttgtgcctgaacacagc
tggaataaaattcttaagaaaaaagatatagctgctttggtggattatgtctataagcaa
ggcggacttcaaatcacggcaagttttttagataagcttaaaaatttaggttttgaatac
gcaactaaggctggaatttctatttcaatcgcagatattattgtcccaaatgacaaacaa
aaagccattgatagtgcgaaaaaacaagtcagagaaattcaaaattcttataatcttggt
ttaatcacttcaatcgaaagatataataaaattatagacatttggaaaagcacaaataac
attctttcaaagggaatgatgaatttgattgaaaaggacaaggaaggctttaattctatt
tatatgatggctgattctggtgcaagagggagtgcagcacaaatttctcaacttgcagcg
atgagagggcttatgacaaagcctgatggttcaattattgagactcctatcatctcaaat
tttcgtgagggtttaaatgtgcttgagtattttatctcaactcacggagccagaaaaggt
ttggctgacactgctcttaaaacggctaatgcaggttatttgacaagaaagctcatcgat
gtggctcaaaatgtaaaaattacgattgaagattgtgggacacatgagggcgtagagatt
aatgaaatcactgccgatagctccattattgaaaccttagaagaaagaattttgggcaga
attttagctgaagatgtgattgatcctatcacaaattcggttatttttactgaaggaact
ttgattgatgaagaaaaagcaaggattttaactgaaagtggagtcaaaagtgttaatata
cgcactcctatcatttgtaaggcgaaaaaaggaatttgtgctaaatgctatggtatcaat
cttagcgagggaaaacttgtaagaccgggtgaggctgtgggtatcatttcagcacaatcc
attggtgagcccggtactcaactcacgcttagaacctttcacagcggaggtgcggcaagt
acagatttacaagacagacaagtcagtgctcaaaaagaaggtttcataagattttacaat
cttaagacctataaaaataaagagggcaagaatatagtcgcaaatcgtagaaacgcagcc
attttgcttgttgaaccaaagattaaagccccatttaaaggtgttatcagcgtagaaagc
attcatgaggatattattgtttgcattagaaataaagagcaagaaagcaaatttatctta
agaaaatatgatttggctaaaccaaatgagctcgcaggtgtgagtggaagtattgatgga
aaattttatttgccttatcaaaatggaagtgaagtcaatgaaaatgaaagtatagtagag
gtgattaaggaaggttggaatatccctaatcgtatcccatttgcaagtgaaattttagtc
aaagatggggacccggttgtgcaaaatatcaaagcaggtgagaaaggcactttgaaattt
tatattttaaaaggcgatggacttgatagagtgagaaatatcaaaaaaggcgatattgtc
aaggaaaaaggtttctttgttgtgattgctgatgagaatgatagagaggctaaaaggcat
tatattccgcgagaatctaagatagaattcaatgatagcacttatattgatgatccaaat
acaatcattgcaagtgcatctaaaaaagaaaaaaccatcattggagaatgggatgcttat
aataataccattatcgctgaaatttcgggtgttgtgagttttgaggatattgaagcaggt
tatagtgcagatgaacaaattgatgaagccactggaagacgttctttggtgattaatgaa
tatttgccaagcggagtaagaccgaccttgcttgtagccggtaaagacgataaagttgtt
cggtatcaattggagccaaaaacggttatttttgtccaagatggcagcaaagttgaacaa
gcagatattttagcaaaaactccgaaggcggttgcaaaatctaaagacattacaggtggt
ctgccaagagtttctgaattatttgaagcaagaaaaccaaaaaatgccgcagtcattgcc
gaaatcgatggagtggtgcattttgataagcctttacgttctaaagaaaggattattata
caagctgaagatggtgcaagtgtggagtatttgattgataaatcaaagcacattcaagtt
agagatggtgaattcattcacgctggtgaaaagcttactgatggcgttgtttcaagtcat
gatgtgcttaaaattttaggggaaaaagccttgcatcattatcttatttctgaaattcag
caagtttatagaggacaaggggttgttatttctgataaacatatagaagtgattgtttct
caaatgttaagacaagttagggttgtcgatagcggaaatactaaatttattgaaggagat
ttaatctcaagacgtaaatttatcgaagaaaatgaaagaattcttcgtatgggaggagaa
cctgccattgcagagcctgtattattaggtgttactcgagctgccattggaagtgatagt
gtgatttctgcagcatcattccaagaaacaacgaaagttctaaccgaagcgagtatagca
ggtaaatttgattatcttgaagatttaaaagaaaatgtgattttaggtcgtataattcct
gtcggaacagggctttatagtgagcaaaaatttaaaattaaagaacaatga
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