Cupriavidus sp. USMAHM13: BKK81_01265
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Entry
BKK81_01265 CDS
T04762
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ccup
Cupriavidus sp. USMAHM13
Pathway
ccup03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BKK81_01265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccup03400
]
BKK81_01265
Enzymes [BR:
ccup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BKK81_01265
DNA repair and recombination proteins [BR:
ccup03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BKK81_01265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
ADDB_N
Zn_ribbon_6
HypA
AAA_19
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
AOZ01032
LinkDB
All DBs
Position
1:complement(258156..260441)
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AA seq
761 aa
AA seq
DB search
MAAVFPAAEPGIVRVALDTPAADSFDYLGSDAATPGAIVSVPFGRRELVGVVLGRADSSE
VPAERLRPVRAQVDWLPPLDANWMALAVFAARYYHRCLGEVMLPALPPALRESAGWAGLA
QRAQGRFYRLLPGAGQALLDSVPARARSVMALAQALTAAADDAGEDGGPGLSASEARALC
SAAPARLAQWEEAGWIEAETRARPLLATEPGRAPSEPPPLHAEQRQAVEAIGAAQGFSPF
LLHGVTGSGKTEVYLHAIAQALAAGPHAQVLMLVPEINLTPQLQARVAARFPGEPLAVLH
SGLAEQERSLQWLAAHRGEARIVLGTRMAIMASLPRLALILVDEEHDTSYKQQDGLRYSA
RDLAVWRAKQLGIPVVLGSATPSMESWWRAEQGAYRKLVLRERAQADAVLPAVRLVDLNH
ERQRQRPLYEGLSVPLLDAVQARLERGEQSLLFLNRRGYAPVLACDACGWLSGCPRCSAY
LVLHRPERRLRCHHCGLEAPVPHHCPDCGNMDIAPLGRGTQRVEEALAARFPQARIARID
ADSTRRKGSAQAMFDDVHAGEVDILVGTQMVAKGHDFQRVTLVGIVHPDAAMFSHDFRAA
EHLFASLMQVAGRAGRAGLAGEVLIQTRYPDAPALQALARHDYDGFAGAQLRERRQAGLP
PFAYQALLTAEYGQLDRALAFLQAARRQAEQGVPAPEVQLHDPVPMSMVRVANRERAQML
VESHSRAALQRFISAWVLTFDGIGEAAKGVRWQLEVDPLRI
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
ctggctgcggtgtttcccgccgcggagcccggcatcgtgcgcgtcgccctggatacgccg
gcggccgacagcttcgactacctcggcagcgacgctgccacccccggcgcgatcgtcagc
gtgcccttcggccgccgcgagctggtcggcgtggtgttgggccgtgccgacagcagcgag
gtgccggcagagcggctgcgcccggtgagggcgcaggtggactggctgcctccgctcgat
gcgaactggatggcgctggccgtctttgcggctcgctactaccatcgctgcctcggtgaa
gtgatgctgccggcccttcctcccgctttgcgcgagagcgccggctgggcggggctcgcg
cagcgggcgcagggcaggttctatcgcttgctgcccggggccggccaggccctgctcgac
agcgtgccggcgcgtgcgcgcagcgtgatggcattggcgcaggcgctgacggccgcggcc
gacgatgccggcgaggatggcgggccgggcctgtccgccagcgaggcgcgcgccttgtgc
agcgccgcgccggcccgcctcgcgcaatgggaagaggctggatggatcgaggccgagacc
cgtgcccgcccgctgctggcaaccgagcccgggcgggcgccctcggagccgccgccgctc
catgcggagcagcggcaggcggtcgaggcgatcggcgcggcgcagggcttttccccgttc
ctcctgcacggcgtcaccggcagcggcaagaccgaggtctacctgcacgccatcgcgcag
gcgctggccgccggcccgcacgcccaggtgctgatgctggtacccgagatcaacctgacg
ccgcagctgcaggcgcgcgtggccgcgcgctttccgggcgagccgctggcggtgctgcac
agcggcctggccgagcaggagcgcagcctgcaatggctggccgcgcatcgcggcgaggcg
cgtatcgtgctgggcacgcgcatggccatcatggcctccctgccgcgcctggcgctgatc
ctggtcgatgaggagcacgatacctcctacaagcagcaggacggcctgcgctactcggcg
cgggacctcgcggtctggcgcgccaagcagctcggcattccggtggtgctgggttcggcc
acgccttcgatggaatcctggtggcgcgccgagcaaggtgcctaccgcaagctggtgctg
cgcgagcgcgcccaggccgacgccgtgctgccagcggtgcggctggtcgacctgaaccac
gagcgccagcgccagcggccgctctacgaggggttgtcggtgccgctgctggacgcggtg
caggcgcgcctcgagcgcggcgagcagagcctgctcttcctcaaccggcgcggctatgcg
ccggtgctggcctgcgatgcctgcggctggctgtccggctgtccgcgctgttccgcctac
ctggtgctgcaccggcccgagcggcggctgcgctgtcaccattgcgggctggaggcgccg
gtgccgcaccattgtcccgactgcggcaatatggacatcgctccgctggggcgcggcacg
cagcgagtcgaagaggccctggcggcgcgttttccacaggcccgcatcgcccgcatcgat
gccgactcgacacgccgcaagggcagcgcccaggccatgttcgacgatgtccacgccggc
gaggtcgacatcctggtcggcacgcagatggtggccaaggggcatgacttccagcgcgtc
acgctggtcggcatcgtccacccggacgccgccatgttcagccacgacttccgcgccgcc
gagcacctgttcgcctcgctgatgcaggtggccgggcgcgccggacgggccggcctggcg
ggcgaggtactgatccagacgcgctaccccgacgctccggctttgcaggcgctggcccgc
catgactatgatggattcgctggcgcccaattgcgcgaacgccgccaggcgggcctgccg
cccttcgcctaccaggccttgctgacggccgagtacggccagctggaccgggcgctggcc
ttcctgcaggccgcgcgccggcaggcggagcagggcgtgccggcgcccgaggtgcaactg
cacgatccggtgccgatgtcgatggtgcgggtcgccaaccgcgaacgtgcccagatgctg
gtggaaagccactcgcgcgcggcgctgcaaaggtttatcagcgcatgggtgctgactttc
gatggcatcggcgaggccgcgaagggcgtgcgctggcagttggaggtggatccgctgcgg
atctga
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