Cupriavidus sp. USMAHM13: BKK81_07035
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Entry
BKK81_07035 CDS
T04762
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ccup
Cupriavidus sp. USMAHM13
Brite
KEGG Orthology (KO) [BR:
ccup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccup03032
]
BKK81_07035
03400 DNA repair and recombination proteins [BR:
ccup03400
]
BKK81_07035
Enzymes [BR:
ccup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BKK81_07035
DNA replication proteins [BR:
ccup03032
]
Prokaryotic type
DNA Topoisomerases
BKK81_07035
DNA repair and recombination proteins [BR:
ccup03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BKK81_07035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AOY99039
LinkDB
All DBs
Position
1:1615241..1617922
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AA seq
893 aa
AA seq
DB search
MDQFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWN
RAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEIRLSKIAHEMLHDIDKETVDFGPNYDGSESEPLILPARIPNLLINGSSGIAVGMAT
NIPPHNLNEVVDACLHLLRNPDATVDDLIELLPAPDFPTAGIIYGIQGVREGYRTGRGRV
VMRAKTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKKIEGISDIRDESDKSG
MRVVIELKRNEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPRLLNLRQMLECFLSHRRE
VVTRRTVFELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPVAKQELMAKSWDSGLV
REMLARAESDTPGGRASYRPDGLPAVFGMQADGLYRLSDSQAQEILQMRLQRLTGLEQDK
IVQEYREVMAIIADLLDILARPERITTIISDELGAIRAEFGDERRSQIELNATELDMEDL
ITPQDMVVTLSHSGYMKSQPISEYRAQKRGGRGKQAAATKEDDWIDTLFVANTHDYILCF
SNRGRLYWLKVYEVPQGSRNSRGRPIVNMFPLSDGEKINVILPVRQFDAEHFIFMATARG
TVKKTALTDFSNPRKAGIIAVDLDEGDFLIGAAVTDGQHDVMLFSDAGKAVRFDENDVRP
MGRQARGVRGMNLEEGQSVIAMLVAPAESADAVDGEAPAVTVGSVLTATENGYGKRTPIS
EYTRHGRGTKGMIAIQTSERNGRVVAAALVAPEDEIMLITTGGVLIRTRVAEIREMGRAT
QGVTLINVDEGTKLSGLQRIVETDGDNAGAGDEAGADDADAETPGGDEPGAAS
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgcgaaagaaacccttccggtctccctcgaagaggaaatgcgccgctcc
tacctcgattacgccatgagcgtgatcgtcgggcgggcgcttcccgatgtgcgggacggc
ctgaagccggtacaccggcgcgtgctctatgcgatgcacgagctcaacaacgactggaac
cgggcctacaagaagtcggcccgtatcgtcggcgatgtgatcggtaaatatcaccctcac
ggcgacacggcagtctacgacaccatcgtccgcatggcgcaggatttctcgctgcgctac
atgctggtggatggccagggcaacttcggctccgttgatggcgacaacgctgcagcgatg
cgctacacggaaatccgcctgtcgaagatcgcccacgagatgctgcacgatatcgacaag
gaaacggtcgatttcggtccgaactacgacggttcggaaagcgagccgctgatcctgccg
gcacgcatccccaacctgctgatcaacggctcgtcgggcatcgcggtcggcatggcgacg
aatatcccgccgcacaacctcaacgaggtggtggacgcctgcctgcacctgctgcgcaat
cccgacgccacggtcgatgacctgatcgaattgctgccggcgcccgatttccccacggcc
ggcatcatctacggtatccagggggtgcgcgagggttaccgcaccggccgcggccgggtc
gtcatgcgggccaagacgcacttcgaggatatcgaccgcgggcagcgccaggcgatcatc
gtcgatgagctgccctaccaggtgaacaagcgcacgctgctcgagcgtatcgccgaactg
gtcaccgagaagaagatcgagggcatctccgacatccgggacgagtccgacaagtcgggc
atgcgcgtggtgatcgagctcaagcgcaacgaagtgcccgaggtggtgctcaacaaccta
tataagaacacccagctgcaggataccttcggcatgaacatggtggcgctggtcgacggc
cagccgcgcctgctgaacctgcgccagatgctggagtgcttcctgtcgcaccggcgtgaa
gtggttacccgccgcaccgtgttcgagctgcgcaaggcgcgcgagcgcggccacgtgctg
gaaggcctggccgtggcgctggccaatatcgacgagttcatcgccatcatcaaggcagcg
cccacgccgccggtcgccaagcaggagctgatggcgaagtcctgggactcgggcctggtg
cgcgagatgctggcacgtgccgaaagcgacacgccgggcggccgcgcttcctaccgtccg
gatggcctgcctgccgtgttcggcatgcaggccgacggcctctatcgcctgtcggattcc
caggcccaggaaatcctgcagatgcgcctgcagcgccttaccggcctcgagcaggacaag
attgtccaggaataccgcgaagtgatggcgatcatcgccgatctgctcgatatcctggcg
cgtccggaacggatcacgaccatcatctccgacgaactgggcgcgatccgcgccgagttc
ggcgacgagcgacgctcgcagatcgagctgaacgccaccgagctggacatggaggacctg
atcaccccgcaggacatggtggtcacgctgtcgcacagcggctatatgaagagccagccg
atctccgaataccgcgcgcagaagcgcggcgggcgcggcaagcaggcggcagcgacgaag
gaagacgactggatcgataccctgttcgtggccaatacccacgactacatcctgtgcttc
tccaatcgtggtcgcctgtactggctgaaggtctacgaggtaccgcagggttcgcgcaat
tcgcgcggccgccccatcgtcaatatgttcccgctgtccgacggcgagaagatcaacgtg
atcctgccggtgcgccaattcgacgccgagcacttcatcttcatggcgacggcgcgcggt
accgtgaagaagaccgcgctgacggacttctccaacccgcgcaaggccggcatcatcgcg
gtcgacctcgatgagggggatttcctgatcggtgcggcggtaaccgatggccagcacgat
gtgatgctgttctccgacgcgggcaaggccgtgcgcttcgacgagaacgatgtgcgtccg
atggggcgccaggcacgtggcgtgcgcggcatgaatctggaggaaggccagagcgtgatc
gccatgctggtggcgccggcggaatccgccgacgctgtcgacggcgaggctccggcagtg
accgtgggcagcgtgctgaccgccactgagaacggctacggcaagcgtacccccatctcc
gaatacactcgacatggccgcggtactaagggcatgattgcgatccagacgagcgagcgc
aatggccgggtggtggccgcggcactcgtggcgccggaggacgagatcatgctgatcacc
accggcggcgtgctgatccgcacccgtgtcgccgagatccgcgagatgggtcgcgccacg
cagggcgtgacgctgatcaacgtcgacgaaggtaccaagctgtcgggtctgcaacgcatc
gtggaaacggatggcgacaacgccggcgccggcgatgaggccggggccgacgacgcggat
gccgagacgccgggcggtgacgagcctggcgcggcgagctga
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