Cupriavidus sp. USMAHM13: BKK81_12960
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Entry
BKK81_12960 CDS
T04762
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ccup
Cupriavidus sp. USMAHM13
Pathway
ccup03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ccup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BKK81_12960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccup03400
]
BKK81_12960
Enzymes [BR:
ccup01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BKK81_12960
DNA repair and recombination proteins [BR:
ccup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BKK81_12960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AOZ00045
LinkDB
All DBs
Position
1:2960582..2961376
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AA seq
264 aa
AA seq
DB search
MRIATWNVNSLKVRLPQVLQWLTEQEQAGTPIDALCLQELKLPDDKFPAAELAQVGYRGL
YTGQKTYNGVAILARTASLPEPTDTLLNIPGFEDEQRRVVTATYGDLRLVCAYFPNGQSP
ESDKFVYKLKWLEALTAWLKDELTRHPRLALLGDFNIAPEDRDVHDPAKWEGQNLVSPPE
RAAFRGLLELGLADAFRRFEQPDKSFTWWDYRMLGFRRNAGLRIDHILLSPALADQCSAC
VIDRVPRTWEQPSDHTPVVATLAG
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattgccacctggaatgtcaactcgctgaaggtacgcctgccccaggtactgcaa
tggctgaccgagcaggaacaggccggtacgccgatcgacgcgctgtgcctgcaggaactg
aagctgcccgacgacaagttcccggccgcggaactggcgcaagtcggctaccgtggcctc
tacaccggccagaagacctacaacggtgtcgccatcctggcacgcacggccagcctgccg
gagccgaccgacaccttgctcaatattcccggcttcgaggatgagcagcgccgcgtggtc
actgccacctatggcgacctgcgactggtctgtgcctacttccccaacggccagtcgccc
gagtcggacaagttcgtctacaagctgaagtggctggaggcgctgacggcctggctgaag
gacgagctgacgcgccatccgcgactggcattgctgggcgacttcaatatcgcgccggaa
gaccgcgacgtgcacgaccccgccaagtgggaaggccagaacctggtgtcgccgcccgaa
cgcgccgccttccgcggcctgctcgaactgggcctggcggatgcattccggcgcttcgag
caaccggacaagagcttcacctggtgggactaccgcatgctcggcttccgccgcaacgcc
ggcctgcgcatcgaccacatcctgctgtcgccggcactggccgaccagtgcagcgcctgc
gtgatcgaccgcgtgccgcgtacctgggaacagccctccgaccatacgccggtggtggcc
acgctggccggctga
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