Cupriavidus sp. USMAHM13: BKK81_15385
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Entry
BKK81_15385 CDS
T04762
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ccup
Cupriavidus sp. USMAHM13
Pathway
ccup03030
DNA replication
ccup03410
Base excision repair
ccup03420
Nucleotide excision repair
ccup03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BKK81_15385
03410 Base excision repair
BKK81_15385
03420 Nucleotide excision repair
BKK81_15385
03440 Homologous recombination
BKK81_15385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccup03032
]
BKK81_15385
03400 DNA repair and recombination proteins [BR:
ccup03400
]
BKK81_15385
Enzymes [BR:
ccup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BKK81_15385
DNA replication proteins [BR:
ccup03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BKK81_15385
DNA repair and recombination proteins [BR:
ccup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BKK81_15385
NER (nucleotide excision repair)
GGR (global genome repair) factors
BKK81_15385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AOZ00465
LinkDB
All DBs
Position
1:complement(3490542..3493364)
Genome browser
AA seq
940 aa
AA seq
DB search
MSDSPKTLLLVDGSSYLYRAYHALPDLRNGEGLPTGAIYGMINMLRKLRNDYPAEYSACV
FDAKGKTFRDDLYPAYKEHRPSMPEDLARQIEPIHEAVRALGWPIVMVEGVEADDVIGTL
AREASAQGVRTVVSTGDKDLAQLVNGEVTLVNTMSGEVLDPAGVQAKFGVPPERIVDYLS
LIGDAVDNVPGVPKVGPKTAVKWLTEHGSLDAVMAGADGIKGVVGENLRKTLDWLPMART
LVTVKTDCDLGAAVSDFHALKDVGEDKDKLVAFFSRYGFKTWLRELTGESLPSLRAQAAK
GAGARAPQAQGGLFDSAPAATPADPVPAPDAPPAETRYETVTTEAALQAWLDRLAEGALV
AVDTETTSLDPMQARLVGISLSLVPGEACYIPVGHCGPDVAGIEQHGQLTREFVLERLRG
WLEDPARPKLGQNIKYDAHVFANHGVTLRGIVHDTMLQSYVLASHRNHGMDSLAERLLGI
KTITYEEVCGKGASQIGFDQIDLARATEYAAEDADVTLRLHRAMFPQLQAVPGLEHVYRH
IEMPVSVVLQKIERNGVLIDAQRLAEQSAQLGQRMLELEQAAYDAAGQPFNLGSPKQIGE
ILFGQMKLPVVKKTASGAPSTDEEVLQKLAEDYPLPKLLLDYRGLAKLKSTYTDKLPKMV
NPATGRVHTSYGQATAVTGRLASTDPNLQNIPVRTEEGRRIREAFIAPPGRVIVSADYSQ
IELRIMAHISGDENLLGAFARGEDIHRATAAEIFGVEREAVSSEQRRYAKVINFGLIYGM
SAFGLAGNLGIEREAAKHYIDRYFTRYPGVARYMEDTRQAAREQGYVETVFGRRLWLPDI
NGGSGPRRQAAERAAINAPMQGTAADLIKLSMIAVQDWLERDRLQTLQIMQVHDELVLEV
PEAELELVKRRLPELMCGVAELRVPLVAEVGSGANWEEAH
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatagtccaaaaacactcttgctcgtcgatggttcgagctatttgtatcgcgcg
tatcacgctctgccggacctgaggaatggcgaggggctgcccacaggggcaatctacggc
atgatcaacatgctgcgcaagctgcgcaacgattacccggcagagtatagcgcctgcgtg
ttcgacgccaagggcaagaccttccgcgacgatctctatccggcctacaaggagcaccgg
ccctcgatgcccgaggacctggcgcggcagatcgaacccatccacgaagcggtgcgcgcg
ctgggctggcccatcgtgatggtggagggcgtggaggccgacgacgtgatcggcacgctc
gcgcgcgaggcctccgcccagggcgtgcgcacggtcgtctcgaccggcgacaaggacctg
gcgcagctggtcaacggcgaggtcacgctggtcaacacgatgagcggcgaagtgctcgat
cccgccggcgtgcaggccaagttcggcgtgccgccggagcgcatcgtcgactacctgtcg
ctgatcggcgatgccgtcgacaacgtgccgggcgtgcccaaggtgggccccaagaccgcg
gtcaagtggctgaccgaacatggctcgctcgatgcggtgatggccggcgccgacggtatc
aagggcgtggtcggcgagaacctgcgcaagaccctggactggctgccgatggcgcgcacg
ctggtcacggtgaagaccgattgcgacctcggtgcggctgtgtccgatttccacgccctc
aaggacgtgggcgaggacaaggacaagctggtcgcgttcttctcccgctatggcttcaag
acctggctgcgcgaactgaccggcgagagcctgcccagcctgcgcgcgcaggccgccaag
ggcgccggcgcgcgcgcgccgcaggcacagggcggcctgttcgacagcgccccggccgcg
acgccggccgacccggtgccggcgccggatgcgccgcccgccgagacccgctacgagacc
gtgaccaccgaggcggcgctgcaggcctggctcgaccggctcgccgagggcgcgctggtg
gccgtcgataccgagaccacctcgctcgacccgatgcaggcccggctggttggcatctcg
ctgtcgctggtgccgggcgaggcctgctacatcccggtgggccactgcggtcccgacgtg
gccggcatcgagcagcacggccagctcacgcgcgaattcgtgctggagcgcctgcgcggc
tggctggaagatccggcccggcccaagctcggccagaacatcaagtacgacgcgcatgtg
ttcgccaaccatggtgtcacgctgcgcggcatcgtccacgacacgatgctgcagagctac
gtgctggcctctcaccgcaaccacggcatggacagcctggccgagcgcctgctcggcatc
aagaccatcacctacgaggaggtctgcggcaagggcgcgagccagatcggcttcgaccag
atcgacctggcgcgcgccaccgagtacgcggccgaggatgccgacgtgacgctgcgcctg
caccgcgccatgttcccgcagctgcaggccgtgcccggcctcgaacacgtgtaccggcat
atcgagatgccggtctcggtggtgctgcagaagatcgagcgcaacggcgtgctgatcgac
gcgcagcgcctggccgagcagagcgcgcagctcggccagcgcatgctggagctggagcag
gccgcctacgatgcggccggccagccgttcaacctcggctcgcccaagcagatcggcgag
atcctgttcggccagatgaagctgccggtggtgaagaagaccgccagcggcgcgccctcg
accgacgaagaggtgctgcagaagctggccgaggactatccgctgcccaagctgctgctg
gactaccgcggcctggccaagctgaagtccacctacaccgacaagctgcccaagatggtg
aacccggccaccggccgcgtgcacaccagctacgggcaggccaccgcggtgaccggacgg
ctggcctcgaccgacccgaacctgcagaacatcccggtgcgcaccgaggagggccggcgc
atccgcgaggccttcatcgcgccgccgggccgcgtcatcgtctcggccgactactcgcag
atcgagctgcgcatcatggcccatatctcgggcgacgagaacctgctcggcgccttcgcg
cgcggcgaggatatccaccgcgccaccgccgccgagatcttcggcgtggagcgcgaggcg
gtcagcagcgagcagcgccgctacgccaaggtgatcaacttcggcctgatctacggcatg
agcgccttcggcctggccggcaacctcggcatcgagcgcgaggcggccaagcactacatc
gaccgctacttcacgcgctatcccggcgtggcgcgctacatggaggacacccggcaggcc
gcgcgcgagcagggctatgtcgagaccgtgttcggccggcgcctgtggctgccggacatc
aatggcggcagcggcccgcgccgccaggccgccgaacgtgccgccatcaacgcgccgatg
cagggcacggcggcggacctgatcaagctgtcgatgatcgcggtgcaggactggctcgag
cgcgaccggctgcagacgctgcagatcatgcaggtgcacgacgaactggtgctcgaggtg
cccgaggccgagctggaactggtcaagcgccggctgcccgagctgatgtgcggcgtggcc
gagctgcgcgtgccccttgtggcggaagtcggcagcggcgccaactgggaagaggcgcac
tga
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