KEGG   Cupriavidus sp. USMAHM13: BKK81_15465
Entry
BKK81_15465       CDS       T04762                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
ccup  Cupriavidus sp. USMAHM13
Pathway
ccup03420  Nucleotide excision repair
ccup03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ccup00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BKK81_15465
   03430 Mismatch repair
    BKK81_15465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccup03400]
    BKK81_15465
Enzymes [BR:ccup01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BKK81_15465
DNA repair and recombination proteins [BR:ccup03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BKK81_15465
   MMR (mismatch excision repair)
    Other MMR factors
     BKK81_15465
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor Viral_helicase1 AAA_30 AAA_12
Other DBs
NCBI-ProteinID: AOZ00480
LinkDB
Position
1:3509087..3511432
AA seq 781 aa
MPDLLANLNAEQLAAVTLPDEPALILAGAGSGKTRVLTTRIAWLIQNGHVSPAGILAVTF
TNKAAKEMQTRLSAMLPVNTRAMWIGTFHGLCNRMLRAHFRDAGLPQTFAILDSQDQLSA
LKRLLKAHNVDDEKYPAKNLQYFINNAKEQGLRPADVEANDDFNKRFVDLYAAYDEQCQR
EGVVDFAELLLRCYELLRYNDAIRQHYQHRFRHILVDEFQDTNVLQYQWLKLLAGFGTQH
PAAVFAVGDDDQSIYAFRGANVGNMRDFEHEFRVRRLIKLEQNYRSHGHILDSANHLISH
NARRLGKNLRTDAGHGEPVRVFQADSDGREAAWLLDEIRDQVAQGASRSEIAILYRSNAQ
SRVIEHALFSAGIPYRVYGGLRFFERAEIKHALAYLQLLENPRNDAAFGRVVNFPTRGIG
ARSLETLQDAARQYNCSLFEAVAYVPGKAGSTLGAFVRLIEQMRADTRRMTLPETVEYVT
NTSGLVTHYQGEKEGQDRIENLQELVTAAQAFVVEEGYGLDALAAVLPAEPAGTRALAAG
DQVQQVLDPEALPVVMTPLVAFLTHASLEAGDNQAQAGQDAVQMMTVHAAKGLEFDVVFI
TGLEEGLFPHENSMMDPDGLEEERRLMYVAITRARKRLYLSFAQSRVLHGQMRYHVRSRF
FEELPDAALKWLTPPAAGPGSQPRRQNEGGWGRDWFKKPEDVPFTGSKPTGGMDRGNNYA
NAQREAGSGFRIGQGVFHNKFGEGVITALEGSGADARANINFKRHGAKWLALAVAKLDPI
D
NT seq 2346 nt   +upstreamnt  +downstreamnt
atgccagacctgctcgccaatctcaacgccgaacaactcgccgccgtcaccctgcccgac
gaaccggccctgatcctggcgggcgcgggcagcggcaagacgcgcgtgctgaccacccgc
atcgcctggctgatccagaacggccacgtctcgccggccggcatcctggcggtgaccttc
accaacaaggccgccaaggaaatgcagacgcgcctgtcggccatgctgcccgtcaacacg
cgcgcgatgtggatcggcaccttccacggcctgtgcaaccgcatgctgcgcgcgcacttc
cgcgacgccgggctgccgcagaccttcgccatcctggacagccaggaccagctctccgcc
ctcaagcggctgctcaaggcgcacaacgtcgacgacgagaagtacccggccaagaacctg
cagtacttcatcaacaatgccaaggagcaggggctgcgcccggccgacgtcgaggccaac
gacgacttcaacaagcgcttcgtcgacctctacgccgcctacgacgagcagtgccagcgc
gagggcgtggtcgacttcgccgaactgctgctgcgctgctacgaactgctgcgctacaac
gacgccatccgccagcactaccagcaccgcttccgccatatcctggtcgacgagttccag
gacaccaacgtgctgcagtaccagtggctcaagctgctggcgggcttcggcacgcagcat
ccggcggcggtgttcgcggtgggcgacgacgaccagagcatctatgccttccgcggcgcc
aacgtcggcaatatgcgcgacttcgaacacgagttccgcgtgcgccggctgatcaagctg
gaacagaactaccgctcgcacgggcacatcctggactcggccaaccacctgatctcgcac
aatgcgcgccgcctcggcaagaacctgcgtaccgacgccggccacggcgagccggtgcgc
gtgttccaggccgactccgacgggcgcgaagcggcctggctgctcgacgagatccgcgac
caggtggcacagggcgccagccgctccgagattgccatcctctaccgcagcaacgcgcag
tcgcgcgtgatcgagcatgcgctgttctcggccggcatcccctaccgggtctacggcggc
ctgcgcttcttcgagcgcgcggaaatcaagcacgcgctggcctacctgcagctgctggag
aacccgcgcaacgacgccgccttcggccgcgtggtcaacttccccacgcgcggcatcggt
gcgcgctcgctggaaacgctgcaggacgccgcgcgccagtacaactgctcgctgttcgag
gcggtcgcctacgtgccgggcaaggccggcagcacgctcggcgccttcgtgcggctgatc
gagcagatgcgcgccgacacgcgccgcatgacgctgcccgagacggtcgagtacgtcacc
aacacgagcggcctggtcacccactaccagggtgagaaggaaggccaggaccgcatcgag
aacttgcaggaactggtgacggcggcgcaggccttcgtggtcgaggaaggctacggcctg
gatgcgctcgccgccgtgctgcccgccgaaccggcaggcacgcgggccctcgccgcgggc
gaccaggtccagcaggtgctggacccggaagcgctgccggtggtgatgacgccgctggtc
gccttcctcacgcacgcctcgctggaggcgggcgacaaccaggcccaggcaggccaggac
gcggtgcagatgatgaccgtgcatgccgccaagggcctggagttcgacgtggtcttcatc
accgggctggaagaaggcctgttcccgcacgagaacagcatgatggacccggacggcctg
gaggaagagcgccgcctgatgtatgtggccatcacgcgcgcgcgcaagcgcctctacctg
tccttcgcgcagagccgcgtgctgcacggccagatgcgctaccacgtgcgctcgcgcttc
ttcgaagaactgcccgacgcggcactcaaatggctgactccgcccgccgccggccccggc
agccagccgcgccggcagaacgaaggcggctgggggcgcgactggttcaagaagccggag
gacgtgcccttcactggcagcaaacccactggcggcatggaccgcggcaacaactacgcg
aacgcgcagcgcgaggccggcagtggcttccgcatcgggcagggggtgttccacaacaag
ttcggcgagggtgtgatcacggcgctggaaggcagtggcgcggatgcgcgcgccaatatc
aacttcaagcggcatggtgccaagtggctggcgttggctgtggctaagctggatcctatt
gattga

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