Cupriavidus sp. USMAHM13: BKK81_17445
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Entry
BKK81_17445 CDS
T04762
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
ccup
Cupriavidus sp. USMAHM13
Pathway
ccup03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BKK81_17445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccup03019
]
BKK81_17445
Messenger RNA biogenesis [BR:
ccup03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BKK81_17445
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
UDPG_MGDP_dh_C
Motif
Other DBs
NCBI-ProteinID:
AOZ00835
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All DBs
Position
1:3941909..3942535
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AA seq
208 aa
AA seq
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MLDREGFRPNVGIILINARNEVFWGKRIGEHSWQFPQGGIKYGETPEQAMYRELHEEVGL
LPEHVRIVGRTRDWLRYEVPDKFIRREIRGHYRGQKQIWFLLRMAARDCDIRLRATDHPE
FDAWRWSQYWVPLEAVIEFKREVYQMALTELSRFLQRGRMAGPYGGHGHHLGHHGGRHGQ
ARQENAGRGNPGPIQPALPANPERSTDD
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcgtgaaggctttcgcccgaacgtcggcattatcctcatcaacgcacggaac
gaggtgttctggggcaaacgtatcggcgaacattcgtggcagtttcctcaaggcggcatc
aaatacggcgagacgccggaacaggcgatgtaccgcgaactgcatgaagaggtcggactg
ctgcccgaacatgtccgaatcgtgggtcgtacccgcgactggctgcgttatgaggtgccg
gacaagttcatccgccgcgaaatccgcggccactaccggggccagaagcagatctggttc
ctgctgcgcatggccgcgcgggattgcgatatccgcctgcgcgccaccgaccaccccgag
ttcgacgcctggcgctggagccagtactgggtgccgctcgaagcggtgatcgagttcaag
cgcgaggtctaccagatggcgctgacggagctgtcgcgcttcctgcagcgtggccgcatg
gccggcccctacggtggacacggccatcacctcggccaccacggcggccgccacggacag
gcgcgccaggaaaacgcgggccgcggcaatccgggcccgatccagccggcgctgccggca
aaccctgaacggagtaccgatgactga
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