Cupriavidus sp. USMAHM13: BKK81_32290
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Entry
BKK81_32290 CDS
T04762
Name
(GenBank) IclR family transcriptional regulator
KO
K20329
IclR family transcriptional regulator, positive regulator for flagellar biogenesis
Organism
ccup
Cupriavidus sp. USMAHM13
Pathway
ccup02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ccup00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BKK81_32290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccup03000
]
BKK81_32290
Transcription factors [BR:
ccup03000
]
Prokaryotic type
Helix-turn-helix
IclR family
BKK81_32290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
HTH_24
MarR_2
HTH_Crp_2
IclR
HTH_36
HTH_3
Xre-like-HTH
HTH_AsnC-type
MarR
RP-C
TrmB
HTH_23
HTH_5
HTH_26
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AOZ04172
LinkDB
All DBs
Position
2:3210080..3210874
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AA seq
264 aa
AA seq
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MTQRTGSFTRQTDGSQSLERGLRLLRAFRVGSSSLSNAELAARTGLPRPTVSRLTRSLVD
GGFLLYDTTERAYRLAVVVVSLADAFHHATVVPAIALPLMREIADAEKVNVGLAVPDQTA
MVYLAAVRHSVDSVSRTRRVEPGTRVPIEQTSIGMAWLAAAPPAVRGAILERIAEKAGDA
WPAVERELGRGIAQAQSLGYCTADYQPGHLTAVGAAFRGPDQLWYGLNISFPPKPGGKRA
VSRYATLLLGLIGKIQSACGSAGA
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
ctgacacagcgcaccggcagctttacgcggcagaccgacggcagccagtcgctggagcgt
ggcctgcgcctgctgcgcgcgttccgggtgggatcatcgagcctgagcaatgcggagctg
gcggcgcgcacgggcctgccgcggccgacggtcagccggctgacgcgctccctggtggac
ggcggcttcctgctctacgacaccacggagcgcgcctaccgcctggcggtcgtggtcgtc
agcctggccgatgccttccaccacgccaccgtggtgccggccatcgcgctgccgctgatg
cgcgagatcgccgacgccgagaaggtcaacgtgggcctggccgtgcccgaccagaccgcg
atggtgtacctggccgcggtgcgccacagcgtcgacagcgtgtcgcgcacccgccgcgtc
gagcccggcacgagggtgccgatcgagcagacgtcgatcggcatggcgtggctggccgcc
gcgccgccggcggtgcgcggcgcgatcctggagcgcatcgccgagaaggccggcgacgcc
tggccggcggtcgagcgggagctgggccgcgggatcgcccaggcacagtcgctcggatac
tgcacggccgactaccagcccggacacctcaccgccgtcggcgcggcgttccgcggccct
gaccagctgtggtacgggctcaacatcagctttccgcccaagcccggtggcaagcgcgcg
gtgtctcggtatgcgacgctgctgctcggcctgatcgggaagatccagtccgcatgcggc
tcggcgggcgcttga
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