Cylindrospermopsis curvispora: IAR63_03210
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Entry
IAR63_03210 CDS
T06771
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ccur
Cylindrospermopsis curvispora
Pathway
ccur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IAR63_03210 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccur03019
]
IAR63_03210 (recQ)
03400 DNA repair and recombination proteins [BR:
ccur03400
]
IAR63_03210 (recQ)
Enzymes [BR:
ccur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IAR63_03210 (recQ)
Messenger RNA biogenesis [BR:
ccur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IAR63_03210 (recQ)
DNA repair and recombination proteins [BR:
ccur03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IAR63_03210 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
GerE
DUF4218
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QNP30103
UniProt:
A0A7H0F237
LinkDB
All DBs
Position
complement(664684..666846)
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AA seq
720 aa
AA seq
DB search
MMQYPDLEKELKKYFGYDQFRPGQRQIIEDALENRDLMVVMPTGGGKSLCFQLPALLKPG
LTVVVSPLIALMQDQVEALRNNNISATLINSSLTTYQVRSREEAIMNGKVKLLYVAPERL
VSERFLPILDVVKEKFGLANFVIDEAHCVSEWGHDFRPEYRQLILLRKRFSHVPTIALTA
TATDRVRADIIQQLGLKQPAVHIASFNRQNLYYEVRPKNRNSYGEILEIIKENEGSGIIY
CLTRKNVDELTLKLQNSQIAALPYHAGLVDHERAKNQTRFIRDDVRIMVATIAFGMGINK
PDVRFVIHCDLPRNLESYYQESGRAGRDGEPSRCTLFFSFGDVKTIEWSIGKKTDPQEQL
IAKQQLRQVIDYAEGTDCRRTIQLGYFGERFPGSCANCDNCRYPKPLQDWTVEAMKFLSC
VARCQEKYGMNYIIDVLRGTKNQKISLHKHDQLSTYGIGKNKTADEWKMLCRSLLHQGLL
EQTNDGYSVLKLNALSWEVMRKQRQVSIAAPVYQKADLVAVNTKALDIEVLVNELRQLRK
QIADELGLAPYIIFQDSTLRLMAQIKPRTLEELGQISGVVSYKVNQYGERFLAVIQSYIQ
EQSWQPPKKSDDDLITNTESTTLELHQQGFTIEQIAQKRNMKTATIIRHLSDLIEKKQPV
DLNLLIPLDRQKKIWQVIDVLGDINLTPIRDYLGESYSYNEIRLVRARWRRENPKNLSPK
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagtatcccgatttagaaaaagaattaaaaaaatactttggttatgaccaattt
cgtcctggacaaagacaaattatagaagacgcactagaaaaccgtgatttaatggtagtt
atgcccacgggaggtggaaagtccctatgtttccaattaccagctcttttgaaaccaggt
ttaacagttgtagtatctcccctgatagcattaatgcaagatcaggtggaagcactaaga
aataataatatttctgccactcttattaatagcagtcttactacttatcaagttcgctct
cgggaagaagcgatcatgaatggtaaggtgaaattattatatgtagctccagaaagatta
gtcagcgagagatttttgcccattttagatgtggttaaagaaaaatttggcctggctaac
tttgttattgatgaagcccattgtgtttctgagtggggtcatgattttcgtccggaatat
agacaattaatcttgctgaggaagcgattttctcatgttcccaccatagctctaaccgca
actgctactgatagagttagagctgatatcatccaacagttaggattgaaacaaccagcg
gttcacattgctagttttaaccgacagaacctgtactatgaagtgcgtcctaaaaataga
aattcctatggggaaatattagagattattaaagaaaatgagggttcgggaattatttac
tgtctaacccgtaagaacgtagatgaactaaccttaaaactacagaatagtcaaattgct
gctttaccctatcatgcaggtttagttgatcacgaaagagccaaaaaccaaactcgattt
atccgtgatgatgtgcgaattatggtggcaactattgcctttggcatgggtattaataaa
cctgatgtacggtttgtcattcactgtgacttgcccagaaatttagaaagttattatcag
gagtcaggtcgcgctggaagagacggggaaccctctcgatgcaccttattttttagtttt
ggtgatgtgaaaaccattgaatggagtataggtaagaaaaccgatccccaagaacagctg
attgctaaacagcagttaagacaagtgatagattatgctgaaggaacggactgtagacgc
acaattcaattggggtattttggggaaagatttcctggtagttgtgctaattgtgataat
tgccgttatcccaaacccttgcaagattggactgtggaagcaatgaagtttttatcttgt
gtggcacgatgtcaggaaaaatatggtatgaattatattattgatgtgttaagagggacg
aaaaatcaaaaaatttctttgcataaacatgatcaactttctacctatggtatagggaaa
aataaaacagcagatgaatggaaaatgttatgcagatctttgttgcatcaagggttattg
gaacaaaccaatgatggctattcggtgttaaaattaaatgccttaagttgggaggtcatg
cgaaaacaacgacaggtctcgattgctgctcccgtatatcaaaaggctgatttggtcgct
gttaatactaaggctttagatatagaagttctggtgaatgaactcagacagctacgaaaa
caaattgctgacgaactgggtttagctccctatattatttttcaggattcgaccttacga
ctaatggcccaaatcaaacccagaaccctagaagagttaggacagatttctggggtggtt
agttataaggtcaaccaatatggagaaaggtttttggcagttattcaatcctatattcaa
gaacaaagttggcaaccaccaaaaaagagtgatgatgatctgataactaatacagaatca
actaccttggaattgcaccagcaaggattcactattgaacaaattgcccaaaaacggaat
atgaaaactgccaccattattcgtcatctgtcagacctgatagaaaaaaaacaacctgtt
gatttgaatttgttaatacctttggatagacaaaagaaaatttggcaggtcatagatgtt
ttgggtgacattaatttaacccccattcgagattatttgggtgagagttatagctataat
gagatacgcctagtcagagctagatggcgaagggaaaatcctaaaaatctatcccctaaa
tag
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