Cylindrospermopsis curvispora: IAR63_12300
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Entry
IAR63_12300 CDS
T06771
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ccur
Cylindrospermopsis curvispora
Pathway
ccur03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IAR63_12300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccur03021
]
IAR63_12300
03400 DNA repair and recombination proteins [BR:
ccur03400
]
IAR63_12300
Enzymes [BR:
ccur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IAR63_12300
Transcription machinery [BR:
ccur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IAR63_12300
DNA repair and recombination proteins [BR:
ccur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IAR63_12300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
QNP28677
UniProt:
A0A7H0EY11
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All DBs
Position
2763138..2765015
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AA seq
625 aa
AA seq
DB search
MRSVQSNQFDYVKIGIASPERIRAWGERTLPNGQVVGEVTKPETINYRTLKPEMDGLFCE
RIFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVAHVWYLKG
IPSYIAILLDMPLRDVEQIVYFNSYVVLAPGNAETLVYKQLLTEDQWLEIEDKIYSEDSQ
LVGVEVGIGAEALLRLLSDINLEEEAEKLRGEIESAKGQKRAKLIKRLRVIDNFIATGSQ
PEWMVMSAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVR
NEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPKLQIHQCGLPREMAIELFQPFVINRLIRSGIVNNIKAAKKLISRNDPSVWDVLE
EVIEGHPVMLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLS
LESQAEARLLMLASNNILSPATGKPIVTPSQDMVLGAYYLTAENPNATKGAGKYFASLDD
VIMAYQQDQVELHAYIYVRFDGDVQTGQPDNEPLEVTENEDGSRTVLYKFRRVREDAQGN
LISQYIYTTPGRVIYNKAIQDALAS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgcgctccgttcaatctaatcaatttgattacgtcaaaattggcattgcttcaccagaa
cgtatccgcgcttggggggaacgtaccttacctaatggtcaggtggttggtgaggtgaca
aaacctgaaaccattaactaccgtaccctcaagccagaaatggatggtttgttttgcgag
cggatctttggccctgctaaggattgggaatgtcactgtggtaaatataaacgggttcgt
catagaggtattgtgtgcgagcgctgtggagtggaggtaacggaatcacgagttcgccgc
catagaatgggtttcattaagttggcagcacctgtggcccatgtttggtatctcaaaggc
attcctagttatattgccatactattagacatgcccctacgagatgttgagcaaatcgtc
tactttaactcctatgtagttttagctcctggtaatgccgaaacccttgtttataagcag
ttattaacagaagaccaatggttagagattgaggataaaatttacagtgaagattctcaa
ctagtaggtgtagaagtaggaattggtgcggaggctttactacgtttattatcagatatt
aatttagaagaagaagcagaaaaactgcggggggaaattgaatcagcaaagggacaaaaa
cgggctaaattgattaaacgtctacgggtgattgacaatttcatcgccactggttcccaa
ccggaatggatggtgatgtcagccattccagtcattccacccgatctccgtcccatggta
caactagacggtggtagatttgctaccagcgatttaaacgacctctatcgtcgggtaatc
aatcgcaataatcgtttagctagactacaggaaatcctggccccggaaatcattgtccgc
aatgaaaaacgcatgttacaggaagcagtagatgctttaattgacaatggtcggagagga
cgtacggtggtaggagccaataaccgtcccttaaagtccctatcagatatcatagaaggt
aaacaggggcgattccggcaaaacctcctgggtaaaagagtagactactcaggacgttcc
gttattgtagttggtcccaaattgcaaattcaccagtgtgggctccccagggaaatggcc
atagaattgtttcagccatttgtgattaaccgtttaattagatcgggaatagttaacaat
attaaagcagccaaaaagctcatttctcgtaatgaccccagtgtttgggatgttttggaa
gaagtcatagaagggcacccggttatgttaaaccgcgctcctacactgcatagactggga
attcaggcttttgaacccatattagtagagggaagagcgatacagttacatcctcttgtt
tgtccggcattcaatgctgactttgatggagatcagatggctgttcacgttcccttgtct
ttagaaagccaagcggaagcaagactgttaatgttagcatccaacaacattctttcacct
gctacgggtaaacctatcgtcacacccagccaagacatggttttgggagcctattacctc
actgctgaaaatcccaatgctaccaagggagcaggcaaatactttgcctccctagacgat
gtaattatggcatatcaacaagatcaagtggaactacatgcatatatttatgttcgattc
gatggcgatgtgcaaacaggacaaccagataacgaacccttggaagtcacagaaaacgaa
gatggcagccgtactgtcttgtataaattccgtcgagtgcgagaagatgcccaagggaat
ttaatttcccaatatatttatacaacccctggcagagtgatttataacaaagcaattcaa
gatgctttagccagctaa
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