Cylindrospermopsis curvispora: IAR63_13875
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Entry
IAR63_13875 CDS
T06771
Name
(GenBank) VacB/RNase II family 3'-5' exoribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ccur
Cylindrospermopsis curvispora
Brite
KEGG Orthology (KO) [BR:
ccur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccur03016
]
IAR63_13875
Enzymes [BR:
ccur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
IAR63_13875
Transfer RNA biogenesis [BR:
ccur03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
IAR63_13875
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
Motif
Other DBs
NCBI-ProteinID:
QNP28933
UniProt:
A0A7H0EYR7
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All DBs
Position
3099167..3101218
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AA seq
683 aa
AA seq
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MEKGTLVEFRVQGDRRLGVVDRPDGKTRWFVVDERGQSHSLAPRQITYIVNGEGYKPTQI
GKFLDQVAPYLDPSSLEVAWELLVAEGASVTPSQMANLLFSESSPYQCYAAHCLLSDDKL
FFKQKGEVYEPRSASQVAERKHQIEVETQKAQGQQEFLLRVERALEGDTVEWQKSDRQRL
DALEKYATLVADIIRMGVNSESLVRNYPPPGPVLETMNMLGRSATPPAALQLLIDLGWWS
PHENLFLRRSSIPVQFPNKILEVAQEILDSPPADLDVNRLDLKHLKVYTIDDESTTEIDD
GLSCEVLEDGRQRVWIHIADPTRWLIPEDELDLEARRRGSTVYLPTGMIPMFPEVLATGP
MSLVQGRLCCSLSFSVILDDSGGVAEYSIHPCLIKPTYRLTYEDVDEMLDLAVQAEPEIQ
AIAGLAQKRKIWRNNQGAISITMPEAMIKVKNDEISIDILDESPSRQLVAEMMILAGEVA
ARYAQSHNIPLPFRGQPQPELPPEDELLQLPPGFVRFCALRRCMPKSEMSTTPLRHAGLG
LDTYTQATSPIRRYSDLLTHFQLKAHLRGEEPPFSAEQIREVMMTVSNTTQELTMVERQT
NRYYALEYLRRHLEQVWEVIVLMWLREDSNLALILLEDLGLQLPMVFKRSVKLGERVLVK
VALADPQKDIIQFQEIVYQDVVN
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
gtggagaaggggacgctggttgaatttagggttcaaggcgatcgccgactgggagtggta
gatcgtccagacggtaagactcgttggttcgtggtggatgaacggggtcaatcccacagc
ctagcaccccgacaaataacctatatcgttaatggagagggttataaaccaacccagatt
ggtaagtttttggatcaggttgcaccttacttagatccatcaagtttagaggtggcgtgg
gaattgttggtagctgagggagcaagtgtcacccccagtcaaatggcaaatctactgttt
tctgagtcctcaccataccagtgttacgccgcccattgcttactatcggatgacaaacta
tttttcaagcaaaagggggaagtttatgaaccgcgtagtgcctcccaggtagcagaaaga
aaacaccagatagaagtagaaacccaaaaagcccaaggacaacaggaatttttactccga
gtagagcgggcactcgagggtgacacagtagaatggcaaaagtctgaccgtcagcgttta
gatgccctggaaaaatatgctactctagtagctgacattatacgtatgggggtaaattcg
gaatctttggtgcgtaactatccacctccaggtcccgtgttagaaactatgaatatgctg
ggacgttctgcaactcccccagcagctttgcaattactgatcgacttagggtggtggagt
ccccatgaaaacctattcctgcgtcgttcctcaattcccgttcagttccctaacaaaata
ttagaagtggcgcaagaaattttggattccccaccagcggatttagatgttaaccgttta
gacctcaagcatctaaaagtatatactattgatgatgaaagcactacagaaatagatgat
ggtttaagctgtgaagtgctggaggatgggagacaacgggtctggatacatattgccgac
cccacccggtggttaataccagaagacgagttagatctagaagctaggagacgcggtagt
acggtttacctacccacaggaatgatccccatgtttccagaagtattggccacaggtccc
atgagtctggtacagggaaggctttgttgttccctgagcttcagcgtaattttagatgat
agtggcggggttgcagagtatagtattcatccctgtttaattaaacctacctatcgcctg
acctacgaagatgtggacgaaatgctagatttagcagtgcaagcagaaccagaaatccag
gcgatcgccggtttagcacagaaaaggaaaatctggagaaacaaccagggcgcaatcagt
attaccatgccagaagcgatgatcaaagtcaaaaatgatgagatcagtatagatatattg
gatgagtctccatctcgacaattagtggcggaaatgatgattttagcgggagaagtagca
gcacgttatgctcaaagccataatattcccctaccctttcgtggtcaaccccaacccgaa
ctaccaccggaagacgaattactgcaactccctccagggtttgtgagattttgtgctcta
cgtcgatgtatgccaaaaagcgagatgagcaccactcccctccgtcatgcaggtttagga
ttagacacttatactcaggctacttcccctattcgtcgttacagcgacctactcacccac
tttcaactcaaagcccatttacggggtgaggaaccacctttttctgctgaacaaatcaga
gaagtgatgatgaccgtgagcaataccacccaagaattaaccatggtagaacggcaaacc
aacagatactacgccttagaatacctacgtcgccatctggaacaagtatgggaggtgata
gttttgatgtggttaagggaagatagtaatctggcattgattttgttagaggatctaggt
ctacaactaccaatggtatttaagcgctctgtaaaattgggtgaaagggtattagtcaag
gtagctcttgcggatccgcaaaaggatattatccagtttcaagaaatagtgtatcaagat
gttgtaaattaa
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