Campylobacter curvus: CCV52592_0182
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Entry
CCV52592_0182 CDS
T00576
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ccv
Campylobacter curvus
Pathway
ccv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CCV52592_0182 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccv03021
]
CCV52592_0182 (rpoC)
03400 DNA repair and recombination proteins [BR:
ccv03400
]
CCV52592_0182 (rpoC)
Enzymes [BR:
ccv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CCV52592_0182 (rpoC)
Transcription machinery [BR:
ccv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CCV52592_0182 (rpoC)
DNA repair and recombination proteins [BR:
ccv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CCV52592_0182 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
ALF45138
UniProt:
A0A0M5MFM8
LinkDB
All DBs
Position
complement(1388307..1392821)
Genome browser
AA seq
1504 aa
AA seq
DB search
MKMNNLKPVEIKEEHRPRDFEAFQLRLASPEKIKSWSYGEVKKPETINYRTLKPERDGLF
CAKIFGPIRDYECLCGKYKKMRYKGIKCEKCGVEVTSSKVRRSRMGHIELVTPVAHIWYV
NSLPSRIGTLLGIKMKDLERVLYYEAYIVENPGEAFYDNENSKKVEKYDVLNEEQYQSLA
ARYEDSGFAARMGGEVIHDMLAELDLTEILEQLKLEVESTNSDAKKKVIVKRLKVIESFL
NSGNRPEWMMITNLPVLPPDLRPLVSLDGGKFAVSDVNDLYRRVINRNSRLKRLLELDAP
EIIIRNEKRMLQEAVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRFRQNLLGKRVD
FSGRSVIVVGPKLRMDQCGLPKKMALELFKPHLLARLEEKGYATTVKQAKKMIEDKTNEV
WECLEEVVKDHPVMLNRAPTLHKLSIQAFHPVLVEGKAIQLHPLVCAAFNADFDGDQMAV
HVPLSQEAIAECKILMLSSMNILLPASGKAITVPSQDMVLGIYYLSLERNDEKGANKIFS
SVDEVMIAEEANTLGLHAKIKTMVDGKTMFTTAGRLILRAILPDFVPDNMWNKIMKKKDI
ANLVDYVYRNGGLEVTADFLDKLKNLGFRYATKAGISISIADIIVPESKQKHIDEAKKKV
REIQRQYGAGLLTDSERYNKIVDIWTDTNNTVAGEMMKLIQNDKGGFNSIYMMADSGARG
SAAQIRQLAGMRGLMAKPDGSIIETPITSNFREGLNMMEYFISTHGARKGLADTALKTAN
AGYLTRKLIDVAQNVKVTMHDCGTHEGVEITDITENGELIESLEERVLGRVLADDVIDPI
TNEILFSEGTLLDEEKAKTISEAGIKSVSIRTPITCKAPKGVCAKCYGINLGEGKLVKPG
EAVGIISAQSIGEPGTQLTLRTFHIGGTASTEQQDRQVIAQKEGFIRYYNLNTYENNGKR
IVANRRSAAVLLVEPKIKSTIDGKIEIEFAHEDVNITIKGKKEEAKYTIRRNDLAKPNEL
AGVSGKIEGKMYIPYSSGDKVAANESIVEIIKEGWNVPNRIPFASELKIADGEPVTQKIL
ADASGVIKFFILNGDYLDRLKDIKKGHKVTEKGLFVVVSDKDGREAVRHYIPRNSIIQLS
DNENVEAKSVIALPENSDKLVIAEWDPYSTPTIAEEAGVVSYEDIEPGYSAAEQFDEATG
QSRLVINEYLPSGVKPTIVVATKNGGMIKYQLDPKTAIFVADGAEVAQADVLARTPKAVA
KSKDITGGLPRVSELFEARRPKNTAIVAEIDGVVRFDKPLRSKERIIIEAEDGATAEYLI
DKTRQIQVRNGEFVHAGEKLTDGLISSHDILRILGEKALHYYLISEIQQVYRRQGVAIAD
KHIEIIVSQMLRQVKIVDSGNTNFIVGDMVSRNKFKEENERIMKMGGEPAIAEPILLGVT
RAAIGSDSVISAASFQETTKVLTEASIAAKFDYLEDLKENVILGRMIPVGTGLYKDKKIK
IKQI
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaataatttaaaaccagttgagataaaagaggagcatagaccgcgcgatttt
gaggcttttcagcttcgtttggcaagccctgaaaagataaaatcatggagctatggcgag
gtcaaaaagcctgagactatcaactaccgcacactaaagcctgagcgtgacggtctgttt
tgcgccaaaattttcggacctatccgcgactacgagtgcctttgcggaaaatataaaaag
atgcgctacaaaggtatcaaatgcgaaaaatgcggcgtcgaggtgacaagctcgaaagtc
cgccgctcacgcatggggcacatcgagctagtgactccggtcgcgcacatctggtatgta
aattcactcccaagccgcatcggaacactacttggcataaagatgaaagatcttgagcgc
gtgctttactacgaggcgtatatcgtcgaaaaccctggcgaagccttttatgataatgaa
aattctaaaaaggtcgaaaaatacgatgttttaaacgaggagcagtatcaatccttggcc
gctcgttatgaggacagcggttttgcggccagaatgggtggcgaagtcatccatgatatg
ctagcagagcttgatctgactgaaattttagagcagctaaagcttgaagtggagtctacg
aattccgatgcgaagaaaaaagtgatagtaaaacgcttgaaagttatcgagagcttttta
aattcaggcaaccgtccggagtggatgatgatcacgaatttgcctgttttgccacctgat
cttaggccgttagtcagccttgacggcggcaaattcgcagtttcagacgtgaatgatctt
tatcgccgtgtcataaatagaaacagccgtctaaagcgcctactggagcttgatgcaccg
gagatcattataaggaacgaaaagaggatgttgcaagaagccgttgatgcgttatttgac
aacggtcgccgtgcaaatgccgtaaagggcgcaaacaaacgccctcttaaatccttaagc
gagatcatcaaaggaaaacagggtcgcttccgtcagaatttgctaggaaagcgcgtggac
ttctcgggacgttccgtcattgttgtcggaccaaagctaaggatggatcaatgcggtctg
cctaagaaaatggcactagagctgtttaagccgcatttgctcgctcgccttgaggaaaaa
ggctatgcaacgaccgtaaaacaagctaaaaagatgatagaggataagacgaacgaggtt
tgggagtgcctagaggaggtcgttaaagaccatccggtcatgctaaaccgcgctccgaca
cttcacaagctctctatccaggcgtttcacccggtacttgtcgagggcaaggctatccag
cttcacccgctcgtttgtgccgctttcaatgccgactttgacggcgatcagatggctgtt
cacgtgccgctaagccaagaggcgatcgcagagtgcaaaattttgatgctaagctcgatg
aatatcttgcttcctgcaagcggcaaagcgataactgtccctagccaagacatggtcctt
ggaatttattatctaagtcttgagcgaaacgacgagaagggcgcaaataaaattttctct
agcgtcgatgaggtcatgatagccgaggaggccaatactcttggtctgcacgcaaagatc
aagactatggtcgatggcaagactatgttcactacagccggccgcttgatacttcgcgcg
atattgcctgattttgtcccggataacatgtggaacaagataatgaagaaaaaagatatc
gcgaatttagttgattatgtctatcgcaacggcgggctagaggtcacggctgattttctt
gataagcttaagaatttaggctttagatacgctacaaaggctggaatttcaatatctatc
gcagatatcatcgtgccggagagcaagcaaaagcatatcgacgaggcaaagaaaaaagtc
cgcgaaattcagcgtcaatacggagctggcttgcttactgactctgagagatataataag
atcgtcgatatttggaccgatacgaataacaccgtcgcaggcgagatgatgaagctcatc
caaaacgataagggaggtttcaactctatttatatgatggcggactccggtgcgagaggc
tctgcggcgcagatccgccagcttgccggtatgcgcggtctgatggcaaaacctgacggc
tctatcatcgaaacgcctatcacttcaaatttccgcgagggtctaaatatgatggagtac
ttcatctcgacccatggcgctagaaaaggtctagctgataccgctcttaaaacggcaaat
gccggttatttaacaagaaagctcatcgacgtggcgcaaaatgtgaaggtcactatgcat
gactgcggtactcacgagggcgtcgagataaccgacatcaccgaaaacggcgagctaatc
gagagcctggaagagcgcgttttaggacgtgttttggcagatgacgttatcgatccgata
acaaatgaaattttattctccgaaggcacactgcttgacgaggaaaaggcaaagaccatc
agcgaagcgggcataaaatcagtaagcataagaacgcctatcacatgcaaagcgccaaaa
ggcgtctgcgctaaatgctacggtataaatttgggcgaaggcaagctcgtaaaacccggc
gaggctgtgggcatcatttcggctcaatctatcggcgagcctggaactcagctaacgctt
aggactttccacatcggaggaacggcctccaccgagcagcaagatcgtcaagtcatagcc
caaaaagagggcttcataaggtattataaccttaacacttacgaaaataacggcaaaagg
atcgttgcaaacaggcgaagcgctgccgtattgctggtcgagccaaagataaaatctacg
atcgacggtaaaatagagatagaatttgcccacgaagacgtaaatatcacgatcaaaggc
aaaaaagaagaggccaaatatacgataagaagaaacgatctggctaagccaaacgagctt
gcgggcgtaagcggcaagatcgaaggaaagatgtatataccatactcaagcggcgataaa
gtagctgcgaacgagagtatcgtagagatcatcaaagagggctggaacgtgcccaatcgt
atcccgtttgccagcgagcttaagatcgccgacggcgagcctgtgacgcagaaaattttg
gctgatgcgagcggagtgataaaattctttatattaaacggtgattatttggatcgttta
aaagatatcaaaaagggacacaaggtcacagaaaaaggcctatttgtcgtagtttccgac
aaagacggtcgtgaggcggtccgccactatataccaagaaattctatcatccagctttcc
gataatgaaaacgtggaggcaaaaagcgtcatcgcgcttcctgaaaatagcgataaactc
gttattgcagagtgggacccttattctactccgactatcgccgaggaggcgggcgtggtc
tcttacgaggatatcgagcctggatattccgccgccgagcagtttgacgaggcgacagga
caaagccgtcttgtcatcaacgagtacttgccaagcggagtcaagccgaccatcgtcgtt
gcgactaaaaatggcggtatgataaaatatcaactcgatccaaagaccgcgatattcgta
gctgacggtgccgaggtcgctcaggccgatgtgctcgccaggacgccaaaggcggtcgca
aaatcaaaagatatcaccggcggtcttccgcgtgtcagtgagctatttgaggctagacgt
ccgaaaaatacggctatagttgccgagatcgacggcgtagttagatttgacaagccgctt
cgctctaaagagcgcatcatcatcgaggccgaagacggcgctaccgccgaatacttgatc
gataagacgcgtcaaattcaagtcagaaacggcgaattcgtccatgctggcgaaaagctt
accgatggcttgatatcaagccacgatatcttgaggatcttgggcgaaaaggcgttacat
tactatctgataagcgaaattcagcaagtttatcgccgacaaggtgtcgcgatcgcagat
aagcacatcgagatcatcgtctctcaaatgcttcgccaagtaaagatcgtagatagcgga
aatacaaatttcattgtcggcgatatggtctcaagaaataaatttaaagaggagaacgag
cgcataatgaaaatgggtggagagccggcgatagccgagccgatccttcttggcgtcacg
cgtgcggctatcggaagcgatagcgtcatctcggctgcatctttccaagagaccacaaag
gtcctcacggaggcatcgatcgcagcgaaatttgactatctcgaagatctaaaagaaaat
gtcatcttgggtcgtatgataccagtgggcacaggtctttataaagataaaaagataaaa
atcaagcaaatttga
DBGET
integrated database retrieval system
