Corvus cornix (hooded crow): 104683156
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Entry
104683156 CDS
T03546
Symbol
YKT6
Name
(RefSeq) synaptobrevin homolog YKT6 isoform X1
KO
K08516
synaptobrevin homolog YKT6
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04130
SNARE interactions in vesicular transport
ccw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
104683156 (YKT6)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104683156 (YKT6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104683156 (YKT6)
Membrane trafficking [BR:
ccw04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
104683156 (YKT6)
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Gene cluster
GFIT
Motif
Pfam:
Longin
Motif
Other DBs
NCBI-GeneID:
104683156
NCBI-ProteinID:
XP_039420187
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Position
22:4728958..4737194
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AA seq
271 aa
AA seq
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MASAPTLFSPQAHGATAMRLYSLSVLYKGDAKVHLLKAAYDVSTFNFFQRSSVQEFMTFT
SQLIAERSALGSRASVKEQEYLCHVYVRTDGLAGVVIADNEYPQRVCFTLLDKVLDEFSR
QVSKMDWPSGSPATITYSALDGYLSKYQNPRDADPMTRVQAELDETKIILVRLQDAPACT
SRWSLGARTTPWNHCWSVGRSWMTWSPNQRCLEHNPKPSTKRPESRIPAVKSCDMEPGVS
TSGPPALHPPPQPPQGCSWGWAEGPQPPGLM
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagccccaacccttttttccccccaggcacacggagccaccgcgatgaggctc
tacagcctaagtgtcctttacaagggtgacgccaaagtgcatttgctcaaagctgcctat
gatgtgtccaccttcaacttctttcagagatccagtgtgcaggagttcatgacgttcacg
agccagctgattgcggagcgctcggcgctgggcagcagggcctcggtcaaggagcaagag
tacctgtgccacgtgtatgtgcggaccgacgggctggccggagtggtgatcgcagacaat
gagtatccacagcgggtttgtttcaccttgctggacaaggtgctggatgagttctccagg
caggtcagcaagatggactggccctcagggtcacctgccaccatcacctactctgccttg
gatggatacctcagcaaataccagaacccccgtgacgccgacccgatgacccgagtgcag
gcagagctggacgagaccaaaatcatcctggtgaggctgcaggacgctcctgcctgcaca
agccggtggtccctgggggcacgcacaacaccatggaatcactgctggagcgtggggaga
agctggatgacctggtctccaaatcagaggtgcttggagcacaatccaaagccttctaca
aaacggcccgaaagcagaattcctgctgtgaaatcatgtgacatggagcccggggtctcc
acctccggaccaccagccctccacccccctccgcagccaccccaggggtgttcctggggc
tgggccgagggtcctcagccccctgggctgatgtga
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