Corvus cornix (hooded crow): 104683201
Help
Entry
104683201 CDS
T03546
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP isoform X1
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccw04121
]
104683201
Enzymes [BR:
ccw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104683201
Ubiquitin system [BR:
ccw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104683201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOC6_Sec15_N
T3SSipB
Filament
Laminin_II
Crescentin
Zn_ribbon_8
MAD
DUF5305
Motif
Other DBs
NCBI-GeneID:
104683201
NCBI-ProteinID:
XP_010388215
LinkDB
All DBs
Position
12:complement(3732591..3752701)
Genome browser
AA seq
537 aa
AA seq
DB search
MWSMRVEHGAPVGPSTGLKVYGSALVCNEESHPDVSWGAGGWPLEAVLQNFEDLLYVFLF
FLSLIQWFDTAPSRTCPQCRSQVSKRHIINKLFFDVTLEEQAAPDAETLQNELDKVKAQL
SLKEKEKRECQAVVDGLRDTLDVRNATIESLQKVVGETEMLCSSLKKQMKFLEQQQEDNR
SSKEEARRLRNKLRTMERIELLLQSQRSEVEEMIKEMGVGQAAVEQLAIYCVSLKKEYEN
LKEARKISGEMTEKLKKELFSVNNKLQKATSELEKTKEELKSTQKDLKNADKEILSLKKK
IDILQDTLKVPSVTRETLSRLVFESPVPVELQHPKLHRPSDSDEINLDATYDVDTPEHQP
CTSPFGTTKRQKLDKKPPPVVNLAKKVLKETVENRADDLEDDALKGLLPAYIRNSVLSKK
PSLGSLWGPHKNMGSVRTGYDGMGGRTKFIEPTNLAEIRPLSVRSKKKVSRPASAAPSSS
SSGSSQSSAVAAALGSLAPGGTARLGSSHKQEVQDECLGCQSESSRENGPGPAPCLV
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcatgcgtgtggaacacggtgctcctgtcggccccagcaccggactgaaggtt
tacggttctgctttagtgtgcaatgaggaatcacatcctgacgtctcctggggagctggg
ggatggcccctggaagcagtgctccagaattttgaggatttactgtatgttttccttttc
tttctcagcctcatccagtggtttgacactgcaccgagccggacatgcccgcagtgcaga
agccaggtcagcaaaaggcacatcatcaataagctgttttttgatgttaccctggaggag
caagcagcaccggatgctgagaccttgcagaatgaactggacaaggtgaaggctcagctc
tccttgaaagagaaagaaaagagggaatgccaggctgttgtggacgggctgagggacact
ctggatgtgcgcaatgccacaatagagtcgctccagaaggtggtgggagagacagagatg
ctgtgctcctctctcaagaagcagatgaaattcctggagcagcagcaggaggataacaga
agttcaaaggaggaggcccgtcggctgcgaaacaagctgagaaccatggagcggattgag
ctgttgcttcagagccagcgctcggaagtggaggagatgatcaaagagatgggagttgga
caggcagcagtggagcagcttgcaatctactgtgtctccctcaaaaaggaatacgagaac
ttgaaggaggctcggaagatctctggtgagatgacagagaagctgaagaaggagctgttt
tctgtcaataacaagctgcagaaagcaacttcagagttggagaagacaaaggaggagtta
aaaagcacgcagaaagatctgaagaatgcagacaaggagatcttgagtttgaagaagaag
atagacatcctgcaggatactctgaaggtcccctctgtaaccagggaaacactcagtcgg
ctagtctttgaaagccctgttcctgtggaactgcagcatccaaagctccaccgcccgtcc
gacagtgacgagatcaatctcgatgctacttatgatgtggacacccctgaacaccagccc
tgcacatccccctttggcactacaaaaaggcagaagctggataaaaagccgcctcctgtg
gtaaatctggcgaagaaagttcttaaggaaacagtggagaacagggcagatgatctggag
gatgatgctcttaaaggactcttgccagcatacatcaggaactctgttctctccaagaag
ccatctttgggcagtttgtggggtccccacaagaacatgggctctgtgaggacgggctac
gatggcatgggaggcaggacaaagttcatagagccaacaaacttggcagaaatccgtcca
ttatcagtgaggagcaagaagaaggtctccagaccagcgtctgcagctccttcttcatct
tcttctggcagcagccagagctctgcagttgctgctgctttgggctctctggcaccaggt
ggaactgcacgtcttggaagcagccacaagcaggaggtgcaggacgagtgtctgggatgt
cagtctgagagcagcagggagaatggacctggaccagctccatgcctggtgtaa
DBGET
integrated database retrieval system
