Corvus cornix (hooded crow): 104683385
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Entry
104683385 CDS
T03546
Symbol
CNTN4
Name
(RefSeq) contactin-4 isoform X3
KO
K06762
contactin 4
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccw04515
]
104683385 (CNTN4)
Cell adhesion molecules [BR:
ccw04515
]
Immunoglobulin superfamily
Contactins
104683385 (CNTN4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_5
Ig_C17orf99
Sp38
C2-set_2
Pur_ac_phosph_N
Tissue_fac
fn3_4
Motif
Other DBs
NCBI-GeneID:
104683385
NCBI-ProteinID:
XP_010388570
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Position
12:18777227..19048264
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AA seq
1029 aa
AA seq
DB search
MRLLWELLVLHSVMVCLADDNTLHGPVFLQEPNSMIFPLDSEEKKVKLSCEVKGNPRPTI
GWKLNGSSIDVGMDYRYSLVEGSLLINNPNKSQDAGTYQCVATNPFGTIVSREAKLQFAY
LENFKTRTRSTVSVRQGQGMVLLCGPPPHSGELSYAWIFNEYPSFVHQDSRRFVSQETGN
LYIAKVETSDVGNYTCVVTNTVTNSRVLGPPTPLVLRNDGVMGEYEPKIEVQFPETVPSA
KGTTVKLECFALGNPVPTISWRRADGKQIPRKARRHRSSGLLEIPNFQQEDAGPYECVAE
NVRGKNVARGQLTFYAQPSWIQRIGDVHAAIEERVSWECRASGRPKPSYRWLKDGEPLLP
QGRVQLEQGSLTIPNVSLSDAGMYQCVAENRHGVIFASAELSVIAIGPDFSKTLLKKLTL
VKVGGDVIIECKPKASPRPTYSWKKGKDILRENERITVLDDGSLRIVNVTKSDAGSYTCV
ATNHFGTASSTGSLVVKDPTRVMVSPFSMDVTVGESIVLPCQVSHDHSLDIVFTWSFNGH
LIDFEKDGDHFERVGGQDSAGDLMIRSIQLKHAGKYVCMVQTSVDKLSAAADLIVRGPPG
PPEAVTIDEVTDTTAQLSWRPGADNHSPITMYVVQARTPFSVGWQAVSTVPEIIDGRTFT
ATVVGLNPWVEYEFRVVAANLIGIGEPSRPSEKRRTEEALPEVTPANVSGGGGSKSELVI
TWETVPEELQNGGGFGYVVAFRPLGTVSWMQTVVASPDAARYVFRNESLPPFSPYEVKVG
VYNNKGEGSFSPVTVVYSAEEEPTRAPTTVLARSLSASDVEVSWAPPWENQHKGRIQGYE
VRCWQHDEKEENAKRIRTVGNQTSTKVSNLRGNALYHLAVRAYNTAGTGPSSAAVNVTTK
KPPPSQPPGNIVWNSSDSKIILNWDQVKALDNESEVRGYKVLYRWNRQSSTSVIETNKTS
VELSLPFDEDYIIEIKPFSDGGDGSSSEQIRIPKISNAYARGSGSSTSSACTLSALSTIM
ISLTARSSL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgctatgggagctgctggtgctgcactcagtcatggtgtgcctggcagatgac
aacaccctgcacgggccggttttcctgcaggagcccaacagcatgatcttccccttggac
tcggaggagaagaaagtgaagctgagctgtgaagtgaaaggaaatcccagaccaaccatt
gggtggaagttaaatggaagcagtattgacgtgggcatggattatcgctacagcctggtg
gaaggcagcctgctgatcaataatcccaataaaagccaggatgctgggacgtaccagtgt
gtagcaacaaaccccttcggaacgattgtcagcagagaagccaagctgcagtttgcttac
cttgagaacttcaagaccagaacgaggagcacggtgtccgtccgccagggccagggcatg
gtgctgctctgtgggcccccaccccactctggagagctcagctacgcgtggatcttcaac
gagtacccgagcttcgtgcaccaggacagccggcgcttcgtgtcccaggaaaccgggaat
ctctacatcgccaaggtggagacctcggacgtgggcaactacacctgcgtggtgaccaac
accgtgaccaacagcagggtgctggggccccccacgcccctcgtcctcaggaatgacggg
gtgatgggagagtacgagcccaaaatagaagtgcagttcccagaaacggttccatctgcg
aaaggaacaacggtgaaactggagtgctttgccttggggaacccagtgcccacgatcagc
tggaggagggcggatgggaagcagatccccaggaaagcccggagacaccgatcgagcggg
ctcctcgaaatccccaactttcagcaagaggacgccggaccctatgagtgcgtggctgaa
aatgtgagagggaaaaacgtggcacgaggacagctgacattttatgcccagcccagctgg
atccaacgcatcggcgacgtgcacgcggccatcgaggagcgcgtgtcctgggagtgccgc
gccagcgggcgccccaagccctcctaccgctggctcaaggacggggagcccctgctgcca
cagggcagagtgcagctggagcagggctctctcaccattcccaacgtgagtctctcggac
gccgggatgtaccagtgcgtggcggagaacaggcacggcgtcatcttcgccagtgcagag
ctcagtgtcatagccattggtccagacttttccaaaactctcctgaagaagttaactctt
gttaaagtgggtggtgacgtcatcattgagtgcaagcccaaagcctcccccagacctact
tattcttggaagaaaggaaaagacatcctgagagaaaatgagagaatcactgttttggat
gacgggagcctgcggatcgtcaacgtcaccaagtcggacgcggggagttacacctgcgtg
gccaccaaccacttcgggacagcgagcagcacgggcagcctggtggtgaaagatccaacc
cgggtcatggtgtcccctttcagcatggatgtcacggttggggaaagcatcgtcctgcct
tgtcaggtgtcccacgatcactccctggacattgtgttcacctggtcattcaatgggcac
ctgatagactttgagaaagatggggatcactttgaaagggtaggaggacaggactcagct
ggtgatttgatgatcaggagcatccagctgaagcacgcggggaaatacgtctgcatggtg
caaacaagtgtggacaagctctcagctgctgcagacctgattgtaagaggtcccccgggt
ccccccgaggctgtgaccatagatgaggtgacggacaccacggcccagctgtcctggagg
ccgggggcagacaaccacagccccatcaccatgtacgtcgtgcaggcacgcacccccttc
tcggtggggtggcaggcagtgagcacagttccagagatcatcgatggcaggacgttcaca
gccacggtggtggggctgaacccctgggtggagtacgaattccgagtagtggctgccaac
ctgatcgggattggggaacccagcaggccttcggagaagagaagaactgaagaagctctc
cctgaggtgaccccagctaatgtgagtggaggtggaggcagcaagtcagagctggtcatt
acttgggagacggtgcccgaggagctgcagaacgggggtggctttggctacgtggtggcc
ttccggcccttgggcacggtcagctggatgcagacggtggtggcctcgccggacgccgcc
cgctacgtgttccgcaacgagagcctgccgcccttctcgccctacgaggtcaaagtgggc
gtctacaacaacaagggggaagggtccttcagccccgtcaccgtcgtctactcagcagag
gaagagccaacgagagccccaaccactgttttggccagaagcctttctgcctcagacgtt
gaagtttcttgggctcccccatgggagaaccagcacaaaggaagaatacagggatatgag
gtccggtgttggcagcacgacgagaaggaggaaaacgccaaaaggatccggacggttggg
aaccaaacatccacaaaagtcagcaacctgaggggcaatgccctctaccacctggcagtc
agggcctacaacacggccggcaccggcccctccagcgccgccgtcaacgtcaccaccaaa
aagccaccaccgagtcagccccccgggaacattgtgtggaattcatccgactccaagatc
atcctgaactgggaccaggtgaaagccttggacaacgaatcagaagtgaggggctacaaa
gtgttgtacaggtggaacaggcagagcagcacgtctgtcatagagacaaataaaacctca
gtggagctgtccctgccctttgatgaagactatatcatcgagatcaaacccttcagcgac
ggcggcgatggcagcagcagcgagcaaatccgaatcccaaagatatcaaacgcctacgcc
agaggctcgggctcgtcaacctccagcgcctgcaccctgtcagccctcagcacaatcatg
atctccctcacagcccgctccagtttatga
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