Corvus cornix (hooded crow): 104683482
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Entry
104683482 CDS
T03546
Symbol
BRPF1
Name
(RefSeq) peregrin isoform X1
KO
K11348
bromodomain and PHD finger-containing protein 1
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccw03036
]
104683482 (BRPF1)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
104683482 (BRPF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H_2
EPL1
Bromodomain
zf-HC5HC2H
PWWP
PHD_2
PHD
PHD_NSD
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
104683482
NCBI-ProteinID:
XP_010388682
LinkDB
All DBs
Position
12:11545243..11557191
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AA seq
1210 aa
AA seq
DB search
MGVDFDVKTFCHNLRATKPPYECPVGTCRKIYKSYSGIEYHLYHYDHDNPPPPQHTPLRK
HKKKGRQARAANKQSPSPSETSQSPGREVMTYAQAQRMVEVDLHGRVHRISIFDNLDVVS
EDEDVPEEVPENGSNKENTETQSVPPKSGKHKNKEKRKDSNHHHHNASASTTPKLPEVVY
RELEQDTPDAPPRPTSYYRYIEKSAEELDEEVEYDMDEEDYIWLDIMNERRKNEGVSPIP
QEIFEYLMDRLEKESYFESHNKGDPNALVDEDAVCCICNDGECQNSNVILFCDMCNLAVH
QECYGVPYIPEGQWLCRRCLQSPSRAVDCALCPNKGGAFKQTDDGRWAHVVCALWIPEVC
FANTVFLEPIDSIEHIPPARWKLTCYICKQRGSGACIQCHKANCYTAFHVTCAQQAGLYM
KMEPVRETGANGTSFSVRKTAYCDIHTPPGSVRRLPALSHSEGEEEDEEEEEEGKGWSSE
KVKKAKAKSRIKMKKARKILAEKRAAAPVVSVPCIPPHRLSKITNRLTIQRKSQFMQRLH
SYWTLKRQSRNGVPLLRRLQTHLQSQRNCDQRDTEDKNWALKEQLKSWQRLRHDLERARL
LVELIRKREKLKRETIKVQQVALEMQLTPFLILLRKTLEQLQEKDTGNIFSEPVPLSEVP
DYLDHIKKPMDFQTMKQNLEAYRYLNFDDFEEDFNLIINNCLKYNAKDTIFYRAAIRLRE
QGGAVLRQARRQAEKMGIDFETGMHFPHCVTVEEAQIQDIDDEDMRLLLSENQKHLPLEE
QLKILLERLDEVNAGKQSIGRSRRAKMIKKEITVLRRKLAHPRDLGRDGLERHSSSARGV
LQSHNPCEKDLQTDSAAEESSSQETGKGLGPNSSSTPAHEVGRRTSVLFSKKNPKTAGPP
KRPGRPPKNRDSQITPGHGNSPIGPPQLPIMGSSQRQRKRGRSPRPSSSSDSDSDKSTED
TTMDLPANGFSSGNQPVKKSFLVYRNDCNLPRSSSDSESSSSSSSSAASDRTSTTPSKQG
RGKPSFSRVNFPEDSSEDTSGTENESYSVGTGRGVGHGMVRKGMGRGAGWLSEDEDSSLD
ALDLVWAKCRGYPSYPALIIDPKMPREGMFHHGVPIPVPPLEVLKLGEQMTQEAREHLYL
VLFFDNKRTWQWLPRTKLVPLGVNQDLDKEKMLEGRKSNIRKSVQIAYHRAMQHRNKVQG
EQSSDSSESD
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtagacttcgacgtgaagaccttctgccacaacctgcgggccaccaagccgccc
tacgagtgcccggtgggcacctgccgcaagatctacaagagctacagcgggatcgagtac
cacctgtaccactatgaccacgacaacccgcccccgccccagcacacccccctgcgcaag
cacaagaagaaggggcgccaggcccgcgccgccaacaagcagtcgcccagcccctccgag
acctcccagtcgcccggccgagaggtgatgacctacgcccaggcccagcgcatggtggag
gtggacctgcatggccgcgtccaccgcatcagcatcttcgataatctcgacgtggtgtcc
gaggacgaggatgttcccgaggaggtgcccgagaatggaagcaataaggagaacacggag
acgcagagcgtcccgcccaaatctgggaagcacaagaacaaggagaagcgcaaggattcc
aaccaccatcaccacaacgcctcggccagcactaccccgaagctgcccgaggtggtgtac
cgagagctggagcaggacacccctgacgccccgcctcgtcccacctcgtactacaggtac
atcgagaagtcagcagaggagctggatgaggaggtggagtatgacatggatgaggaggat
tacatctggctggacatcatgaatgagaggcggaagaacgaaggcgtgagccctattccc
caggagatctttgagtacctgatggaccggctagagaaggagtcctactttgagagccac
aacaagggggacccaaacgccttggtggatgaggatgccgtctgctgcatctgcaacgat
ggggagtgtcagaacagcaacgtcatcctcttctgcgacatgtgcaacctggctgtgcac
caggagtgctatggggtgccctacatccctgagggacagtggctctgcagacggtgcctg
cagtcaccctcgcgcgctgtggactgtgccctctgtccaaacaaggggggggccttcaag
cagacggacgatgggcgctgggcacacgtggtctgtgccctctggatcccggaggtgtgc
tttgccaacaccgtcttcctagaacccatcgacagcatcgagcacatcccgcccgcacgc
tggaagctgacctgttacatttgcaagcagcgcggctctggggcttgcatccagtgtcac
aaagccaactgctacaccgccttccatgtcacctgtgcccagcaggccgggctgtacatg
aagatggagcccgtccgggagacgggtgccaatggtacctccttcagtgtgcgcaaaact
gcctactgcgacatccacacaccgccaggttccgtgcgcaggcttcccgccctctcccac
agtgagggagaagaggaggatgaggaggaagaggaggaggggaagggctggagttctgag
aaagtcaaaaaagcaaaggccaagtctaggatcaagatgaagaaggcacggaagatcctg
gcagagaaacgagctgcagcgcctgtggtttccgtgccctgcatccctccccacaggctc
agtaagattacaaaccgtttaaccatccagaggaagagccagttcatgcagaggctgcac
agctactggactctgaagagacagtcccgcaatggtgtccccctgctccgccgccttcag
acacacttgcagtcacagagaaactgcgaccagagagacactgaggataagaactgggcc
ctgaaggaacagctgaagtcatggcagcgcctgcgccatgacctcgagcgtgcgcgcttg
ctggtggagctgatacgcaagcgggagaagctcaagagagagacgatcaaagtgcagcag
gtggcgctggaaatgcagctgacccccttcctcatcctcctccgaaagacgcttgagcag
ctgcaggagaaagacacgggcaacatcttcagtgagccggtccctctgtctgaggtccca
gactacctggatcacatcaagaagccgatggattttcagacaatgaaacaaaatctggaa
gcctatcgctatctgaattttgatgactttgaggaggatttcaacctgattattaacaac
tgtttgaaatacaatgccaaagacacaatcttctaccgggcagccatccgtctgcgggag
cagggaggtgccgtgctccggcaggctcgccggcaggcagagaagatgggcattgacttt
gagacaggcatgcacttcccccactgtgtaacagtggaagaggctcagatccaagacatt
gatgatgaagatatgcggctgctgctctcggagaatcagaagcacctgcccttggaggag
cagctaaagatcctgctggagcggctggatgaggtcaacgctggcaagcagagcatagga
cggtcccgccgggccaagatgatcaagaaggagatcacagtcctacggcggaagctcgca
cacccacgggacctgggccgggatgggctggagcggcacagctcctctgccaggggagtc
ctgcagtcccacaacccctgtgagaaggacctgcagacggacagtgctgcggaggagagc
agcagccaggagactggcaaaggtctaggtcccaattcttcttctaccccagcacatgaa
gttggcaggaggacctctgttctcttctccaagaagaaccctaaaactgcaggccctcca
aaacgtccaggacgccccccaaagaatcgagacagccagatcactcctgggcatgggaac
agccccattgggcccccccaactgccaataatggggtcctcccagcggcagaggaagaga
gggcgaagcccacgccccagctccagctcggacagtgacagtgacaagtccacagaggac
accaccatggacctgccagccaacggtttcagcagtgggaaccagcccgtgaagaagagc
ttcctggtgtaccgcaacgactgcaatcttccccggagcagctccgactcagagtccagc
agcagcagcagcagcagtgctgcctcagaccgcaccagcacaacgccctccaagcagggc
agagggaaaccctccttttcccgagtgaacttcccagaggacagcagtgaggacacatca
gggacggagaatgagtcctactccgtgggcacgggacgaggtgtggggcacgggatggtg
cgtaagggtatggggcgtggcgcggggtggctgtctgaggatgaggattcctccctggat
gccctggacctggtgtgggccaagtgccggggttacccctcctacccagcgttgatcatt
gaccccaagatgccgcgggaaggcatgttccaccatggcgtccccatccccgtgcccccc
ttggaggtgctgaagctgggggagcagatgactcaggaagcacgcgagcacctctacctt
gtcctgttcttcgacaacaagcgcacttggcagtggttgccccggacaaagctggtgcct
ctgggggtgaaccaggacctggacaaagagaagatgctggagggccgcaagtccaacatc
cggaagtcggtgcagatcgcctaccaccgcgccatgcagcaccgcaacaaggtgcagggc
gagcagagcagcgactccagtgagagcgactga
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