Corvus cornix (hooded crow): 104683487
Help
Entry
104683487 CDS
T03546
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04510
Focal adhesion
ccw04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104683487
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104683487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Laminin_I
GAS
Borrelia_P83
Nup49_C
Motif
Other DBs
NCBI-GeneID:
104683487
NCBI-ProteinID:
XP_039415257
LinkDB
All DBs
Position
12:11645683..11660067
Genome browser
AA seq
1940 aa
AA seq
DB search
MESTRLLFLPSASANKRHYPCVTVKSLWNPALVHSRAPRRATGLPAQHPAQPVQRIPGST
DQHREQQLSPARAQPEPSGPPTPQPTRATSHLPSTPGSHGHRQILWLPMDLLALALLLVG
GQVAGGWQDPDLSHGCARGSCYPATGNLLVGRAARLSATSTCGLDGPQEYCIVSHLQDSE
KCFTCDSRDPSRPESHRIENVIYLSSPHDRRTWWQSENGVEHVSIRLDLEGEFHFTHLIM
KFKTFRPAAMLVERSADFGRTWKVYRYFAYNCSKLFPGIPNHPSGLVDEVLCDQRYSEIE
PSSHGEVIFKVLDPSIPVADPYSPDIQDLLRVTNLRVNLTKLHTLGDNLLDSRQEVLHKY
YYAVDELVLRGSCFCHGHAAHCAPAPGAPTPSVPGMIHGRCVCEHHTQGLNCERCEDFYQ
DLPWRPAEGSSTNACRRCDCNEHSRRCHFDMAVFLATGNTSGAVCDGCQHNTMGRHCHLC
KPFYYRHPRSDIRSPTACAPCDCDPAGSLDGGACDGHTDVALGMIAGQCRCKENVAGPRC
DRCQHGAYGLSHGDPQGCQPCRCDPRGTVAGSSPCDPISGDCYCKRFVAGRSCSQCVPEF
WGLSYDLGGCRPCACDFGGAYNNRCSMEDGACPCRPHIMGRQCDQVQPGFFCAPLDYYTY
EAEQATGHGHSHPQLPGAIREEVPQDCLEYDTREPGGRKGHSQHQRSPSRAPQSPVPSRR
SRQQPPKLDVEEAVRDSAGRMVTWTGLGFARVRDGAGLTFHVDNVPYPMDYELLLRYEPE
SAEDWEAVVSVSSRVLPTSSRCGNLLPSEQMYRENLPHSQRYVLLSRPFCFEPSTPYEVT
MRLQRAGVTQRHPGAFILIDSLVLLPRVSELPGFHGAEAAARQEELERYQCLEVFHMAPP
HPLAQACARLVCSVSALMHGGALPCQCDPQGSRSSECQVQGGQCECKPHVIGRRCDRCAP
GSYGFGPLGCSPCTCSPEGSVSQLCDEVSGQCRCQPGTVGRQCDQCQPGHWGFPACRPCQ
CNGHAEECDPRTGTCLRCRDHTDGRHCERCQDGYYGNPVLGSGQQCRPCPCPGYPGTRHY
HGSACHADDKTHHIVCLCAPGYAGPRCDRCSPGYFGAPEMEGGVCRPCQCNNNIDASDPE
GCDPHTGQCLRCLYHTAGPHCAQCQPGYYGNALQRSCRRCGCDPRGTLASHCTNGTCSCD
RGTGACACRPNVVGKSCDRCAPHFWSLGGPRGCEPCGCHPTHALHPACDTVTGQCQCRPG
FGGRVCSQCQEHHWGDPEQECRACECEPLGAESPQCEQDNGQCRCRLGFGGLRCDRCQRG
YQEPFPHCSPCHPCFGRWDLVVGSLRDRLQRLGAQVQALREGGSALPLSPRRLRELEEAL
GHVERLLGEGDSPGGPLLDGLPRQLGGTRMELDNFWKHLQELEQHLDLLAQADMQHHDRL
AELSRDLGDLNRTTSHLQILLGTIVAAGFSESYRSIVASVEASRQAEVVANGTAGELSRA
QMTRRATERVLRHRGDTFRRGTAAARKSLREAQKRVMELNIARINEKICGAPGDQSCKHA
SCGGALCRDSAGTRHCGGIGCAGALPVSARALSSAHNASQQLDEALGQLAVVAQKPGAPQ
MQEVQELAQGARSWAEEALGRSQAARSHAEKATAQLRDFIRRIKAFLAEEGADPGSIELV
ARQVLNISLPSSPRQIQELLREMRESIGQLQGVDAVLNSTAEGLAVARDLLAQGQEARER
AEGIRDELAGTQQALEVARTQAMTAGSTLESARDAIRVAENRAREAERRLQVLDKKESQA
QRRLQELARHINALQEHGRDAHHMAQQAKEGAQRATTTSGTLTQDLAQVTQRYVVLKNQV
GMLDRVSGGALQRVSQLTAEAQDLLDKASNSKRKLEDLEQRFGANERAMAEKVSRLQALE
QQVTGLLQEIRERANAYATC
NT seq
5823 nt
NT seq
+upstream
nt +downstream
nt
atggagagtacacggctcctcttccttccttcggcctcggctaataaaaggcactatcca
tgcgtgacagtgaagtctctgtggaacccggcccttgtgcacagccgtgctccccgcagg
gctacagggctgccggctcagcacccagctcagccagtccaaaggatcccaggcagcacc
gaccagcacagggaacagcagctgagcccagcccgagcccagcccgagcccagcgggcct
ccgactccgcagcccacccgggccaccagccacctgcccagcaccccaggctcccacggg
cacaggcagatcctgtggttgcccatggacctcctggcacttgctctcctcctggtgggg
ggacaggtggcagggggctggcaggaccctgacctgagccatggctgcgcccgtggcagc
tgctacccagccactgggaacctgctggtggggcgagctgcccgcctaagtgccacctcc
acctgcgggctggacgggcctcaggagtactgcatcgtcagccacctccaggattcggag
aaatgcttcacctgtgactcacgtgacccgtcccggcctgagagccaccgcatcgagaat
gtcatctacctgagcagcccccatgaccgacggacctggtggcagtcagagaatggtgtg
gagcacgtcagcatccgcctggacctggagggcgagttccacttcacccaccttatcatg
aaatttaaaaccttccgccctgcggccatgctggtggagcgttcagccgactttgggcgc
acctggaaggtgtatcgctactttgcctacaactgctccaagctcttccctggaatcccc
aaccacccatcagggcttgtggatgaggttctgtgcgaccagcgctactctgagattgag
ccctccagccatggggaggtcatcttcaaggtgctggacccctccatccccgtagcagat
ccctacagcccagacatccaggacctgttgcgtgtcaccaacctgcgggtgaacctcacc
aagctgcacacgctgggggacaacctgctggactcacggcaggaggtgctgcacaagtac
tactatgctgtggatgaactggtgctgcgcgggagctgcttttgccacggccacgccgcc
cactgtgccccagcaccgggtgccccaacaccctctgtccctggcatgatccacgggcgc
tgtgtctgcgaacaccacacgcaggggctgaactgcgagcgctgcgaggacttctaccaa
gacctgccctggcgcccggccgagggctccagcaccaacgcctgtcgccgctgtgactgc
aatgagcactcccggcggtgccactttgacatggctgtgttcctggccacggggaacacc
agtggggctgtgtgtgatggctgccagcacaacaccatgggccgccactgccacctctgc
aagcccttctactaccggcaccctcgctctgacatccggtcccccactgcctgcgcccca
tgcgactgtgacccggcaggctcgctggatggaggtgcctgcgatgggcatacggacgtg
gcgctgggcatgattgcggggcagtgccgctgcaaggagaatgtggccggtccccgctgt
gaccgctgccagcacggtgcctatggcctcagccatggcgacccacagggctgccagcca
tgcaggtgtgacccacggggtacggtggcgggcagctccccgtgtgaccccatcagtggg
gactgctactgcaaacgcttcgtggctgggcgctcctgcagccagtgcgtgcccgagttc
tggggtctgagctacgacttggggggctgccggccctgtgcctgcgacttcgggggagcc
tacaacaaccggtgctccatggaggatggggcatgtccctgccgtccccacatcatgggg
cggcagtgtgaccaggtacaacccggcttcttctgcgcccccctcgactactacacctac
gaggccgagcaggccaccggccatggccacagccacccccagctcccgggtgccattcgg
gaagaggtgccccaggactgcctggagtatgacaccagggagccgggggggcggaaggga
cactcacagcatcagcgcagcccctcccgtgccccccagtcccctgtcccctcgcgccgc
agccgccagcagccccccaagctggatgtggaggaggcggtgcgggacagtgctgggcgc
atggtgacgtggacgggcttggggtttgcccgggtgcgggacggggctggcctgaccttc
cacgtggacaatgtgccctaccccatggattacgagctgctgctgcgctacgagcctgag
tcagccgaggactgggaggccgtggtcagtgtcagctcccgggtgctgcccaccagctct
cgctgtgggaacctgttgccctccgagcagatgtaccgtgagaatctgccccacagccag
aggtacgtgctgctgtcccggcccttctgctttgagcccagcaccccttacgaggtgacc
atgcgccttcagcgggccggtgtcacccagcgccaccctggtgccttcatcctcatcgac
tcgttggtgctcctgccgcgggtgtcagagttgccaggcttccacggagcagaggcagca
gcgcgccaggaggagctggagcggtaccagtgcctggaggtgtttcacatggcccctcct
catcccctggcccaggcctgtgcccgcctggtctgcagcgtctcagccctgatgcacggc
ggggcgctgccctgccagtgcgacccacagggctcccgcagcagcgagtgccaggtacag
ggcgggcagtgcgagtgcaagccccacgtcatcggccgacgctgcgaccgctgtgcccca
ggcagctacggcttcgggcccctgggatgcagcccatgcacctgctccccagagggctca
gtgtcccagctgtgcgacgaggtgagcgggcagtgccggtgccagcctggcactgtgggc
cggcagtgtgaccagtgccagcctgggcactggggcttccctgcctgccggccctgccag
tgcaatgggcacgccgaggagtgcgacccccggacgggcacctgcctgcgctgccgtgac
cacacggacggacggcactgtgagaggtgccaggacggttactatgggaaccctgtgctg
ggctcggggcagcagtgccggccctgcccctgccctggctaccctggcacacggcattac
cacgggagcgcctgccacgccgacgacaagacccaccacatcgtctgcctctgcgcccct
ggatacgcggggccccgctgtgaccgctgctcccccggttactttggggctccggagatg
gaggggggggtgtgccggccctgccagtgcaacaacaacatcgacgccagcgacccggag
ggctgcgacccccacacggggcagtgcctgcgctgcctgtaccacactgccgggccacac
tgtgcccagtgtcagccgggctactatggcaatgccttgcagcgcagctgccggcgctgt
ggctgtgacccacggggtacattggcctctcactgcaccaatggcacctgctcttgtgac
cgtggcacaggagcctgtgcctgccggcccaatgtcgtgggcaagagctgtgatcgctgc
gcaccccacttctggagcctgggggggccaaggggctgtgagccctgtggctgccacccc
acacatgccctgcaccctgcctgtgacacagtgacagggcagtgccagtgccggcctggc
ttcgggggccgtgtctgttcccagtgccaggagcaccactggggagaccctgagcaggag
tgccgagcctgtgagtgtgagccgctgggtgctgagagcccacagtgcgagcaggacaac
gggcagtgccggtgccggctgggattcggggggctgcgctgtgaccgctgccagcggggc
taccaggagcccttcccccactgctcaccctgccacccttgcttcgggcgctgggacctg
gtcgtgggcagcctgcgggacaggctgcagcgccttggggcacaggtgcaggcactgagg
gagggagggtccgcactcccactcagcccccgtcgcctgcgggagctggaggaggctctg
gggcacgtggaacggctgctgggagagggggacagccctggtggtcccctcctcgatgga
ctgcccaggcagctgggtggcaccaggatggagctggacaacttctggaagcacctccaa
gagctggagcaacatctagacctgctggcacaggcagatatgcagcaccatgaccggcta
gctgagctgagccgcgatctgggagacctcaaccgaaccacctcccaccttcaaatcctc
cttggcactatagtggcagctggattcagtgagtcttaccgcagcattgtggcatcggtg
gaggcctcacggcaggcggaggtggtggccaatggcacagctggcgagctaagtagggca
cagatgacgcggcgggcgactgagcgggtgctgcggcatcggggcgatactttccgccgt
ggcacagccgcagcccggaaatccttgcgggaggcacaaaaacgggtgatggaactcaac
attgccaggatcaatgagaagatttgtggggcacctggagaccagagctgcaagcacgcg
tcttgcggaggagccttgtgccgggacagtgcagggacaaggcattgcggtggcattggg
tgtgcaggagcactgcctgtctcagctcgagccctgagcagtgcccataatgcctcgcag
cagctggacgaggcattagggcagttggctgttgtggcacagaagccaggtgcccctcag
atgcaggaggtgcaggagctggcacagggggcacggagctgggcagaggaggcactgggg
cgctctcaggccgcccgcagccatgcagagaaggcgacggcccagctgcgggacttcatc
cgccgaatcaaggccttcctggcagaggagggagctgacccgggcagcattgagctggtg
gcccggcaggtgctgaacatctccctgcccagcagccccagacagatccaggagctgctg
cgggagatgcgggagagcattggccagctgcagggggtggacgccgttctcaacagcaca
gcagaggggctggctgtggcacgggatctgctggcacaggggcaggaggccagggagcga
gcagaaggcataagggatgagctggcagggacacagcaggcactggaggtggcgcggaca
caggcaatgacagcagggagcaccctggagagcgccagggatgccatccgggtggccgag
aacagagccagggaggcggagcgcaggctgcaggtgctggacaagaaggagtcacaggca
cagaggcggctgcaggaactggcacggcacatcaacgccctgcaggagcatggccgggat
gctcaccacatggcccagcaagccaaggagggggcacagcgtgccaccaccacctcgggg
acacttacccaggacctggcacaggtaacgcagcgttatgtggtgctgaagaaccaagtg
ggcatgctggacagggtgtctggtggggccctgcagcgtgtgtcacagctgacagcagag
gcccaagacctcctggataaggccagcaacagtaagaggaaactggaagacctggagcag
cgctttggggccaatgaacgggcgatggcggaaaaggtgtcacgactgcaggctttggag
cagcaggtcaccgggctgttgcaggagatccgggagagggccaacgcttacgccacctgc
tag
DBGET
integrated database retrieval system
