Corvus cornix (hooded crow): 104683681
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Entry
104683681 CDS
T03546
Symbol
GIGYF2
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104683681 (GIGYF2)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104683681 (GIGYF2)
Surveillance factors
Other surveillance factors
104683681 (GIGYF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Motif
Other DBs
NCBI-GeneID:
104683681
NCBI-ProteinID:
XP_019136165
LinkDB
All DBs
Position
9:25153848..25229430
Genome browser
AA seq
1323 aa
AA seq
DB search
MAAETQTLNFGPEWLRALSSGGSVTSPPLSPALPKYKLADYRYGREEMLALFLKDNKIPS
DLLDKEFLPILQEEPLPPLALVPFTEEEQRNFSMSVNSAAVLRLTGRGGGTVVGAPRGRS
SSRGRGELPVGCAPMYPGRGRGESGFYQRSFDEVEGGFGRGGGREMHRSQSWEERGDRRF
EKPGRKDPVRPNFEEGGTATAGRKHEFIRSESENWRIFREEQNGEDEDGGWRLAGSRRDG
ERWRPHSPDGPRSAGWREHMERRRRFEFDFRDRDDERGYRRVRCGSGSMDDDRDSLPEWC
LEDAEEEMGTFDSSGAFLSLKKVQKEPIPEEQEMDFRPVEEGEERSDSEGSHNEEAKDHE
KTKKEGEKTEKVVAEAVEEAAQASSPAARSDTPPKSQPPDPLQANLFERKEESVPERTEK
AEDKENRVENTLSAKMSNRGEDLASLAQPLPQISADTAASAHLSPPVSNSNPVLRPVQTP
VTAAPGMGNIPADPDDEEGLKHLEQQAEKMVAYLQDSALDDERLAAKIQEHRAKGSSMPL
FHEAMQKWYYKDPQGEIQGPFSNQEMAEWFQAGYFTMSLLVKRACDETFQPLGDIMKMWG
RVPFTPGPAPLPHLGELDQERLTRQQELALIQMQHLQYQHLLIQQQYAQMLAQQQKAALS
SQQQQQLAILLQQFQALKMRISEQNMMPPVTRSVSVPDTGSIWELQSASQPTVWEGSSVW
DLPIDTAAQGPALEQLQQLEKAKAAKLEQERREVEMRAKREEEERKRQEELRRQQEELLR
RQQEDERKRREEEELARRKQEMTVRAERGEAVDLICLDFRKAFDVILHKRLVYKEEALRR
QREQEIALRRQREEEERQQQEEALRRLEERRREEEERRQREELIRKQEEEAAKWAREEEE
AQRRLEESRLRMEEEAARQRLEEEERKRKELELQRQKEIMRQRQQQQEALRRLQQQQQQQ
QLAQMKLPSSSTWGQQSNSGACQSQTTLSLAEIQKLEEERERQLREEQRRQQRELMKALQ
QQQQQQQQKLSGWGNVTKPTGTTKSLLEIQQEEARQMQKQQQQQHQQPNRVRNTTHSNLH
TSIGNSVWGSLNTNPSNQWASDLVSSIWSNADTKNSNMGFWDDAVKEVGPRNSTNKNKSN
ASLSKSVGITSRQNKKVEEEEKLLKLFQGVNKAQDGFTQWCEQMLHALNTANNLDVPTFV
SFLKEVESPYEVHDYIRAYLGDTPEAKEFAKQFLERRAKQKASQQRQQQQQQDSVWGMNH
SSLHSVFQTNQSNNQQSNFEAVQSGKKKKKQKMVRADPSLLGFSVNASSERLNMGEIETL
EDY
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaaactcagacacttaactttgggcctgaatggctgcgagctttgtctagt
ggcgggagtgtgacatcccctcctctgtctccggctttgccgaagtacaaactagcagac
tatcgctatgggagagaagaaatgttggcactttttctaaaggataataagataccttca
gaccttctggataaggaatttctgcctattttacaagaggagcccctgccaccactggca
cttgtaccttttacagaagaagaacagagaaatttctcgatgtctgtaaacagtgctgct
gtcctgcggttgacgggacgcggaggaggaacggtggtaggggctcctcgaggtcgaagt
tcctctagaggtcgaggtgagctgccagtgggatgtgctccaatgtatccaggcagaggc
cgaggagaaagcggtttctaccaaagaagttttgatgaagtggagggtggatttgggcga
ggagggggcagggaaatgcacagatcacagagttgggaggaaaggggagacagacgcttt
gaaaaaccagggcgaaaagatccagtgagaccaaactttgaggaaggtggtacagcgact
gcggggaggaaacacgaatttatacgctctgagagcgagaactggcgcatcttcagggag
gaacagaatggggaagatgaggatggaggctggcgactggctgggtcacggagggatggg
gagaggtggcgtcctcacagtccagatggccctcgttccgcaggctggcgggagcacatg
gagcgacggcggagattcgagttcgatttccgggaccgagatgacgagcggggctatcgc
cgcgtgcgctgcggcagcggcagcatggacgacgacagggacagtctccctgagtggtgc
ttggaggacgcggaggaagaaatgggcacttttgactcctctggagcatttctctcttta
aagaaggtgcagaaggagccgataccggaggaacaggagatggacttccggcctgtggag
gaaggggaggaaaggtctgattctgaagggagccacaatgaagaagccaaagatcatgaa
aagaccaagaaagagggggagaaaacagaaaaagtagtggcagaagcagtggaggaggca
gctcaggcatcgtctccagctgccaggtcagacactccaccgaaatcccagcctccagac
ccgctgcaggcaaacctttttgaaaggaaggaagagtctgtgccagaaagaacagaaaaa
gcagaagataaagagaatcgagtggagaatacactgtcagccaaaatgtccaacagaggg
gaagatttggcttctcttgctcaacctttgccacagatttctgcagacacagctgcttct
gctcatctttctcctcctgtttccaattcaaatcctgttctgcggccagttcaaacacct
gtcacagctgctccaggcatgggcaacattcccgctgacccagatgatgaagagggcctc
aaacacctagagcagcaagcagaaaaaatggtggcatatctgcaggacagtgcccttgat
gatgaaagactagcagcaaaaattcaagagcacagagcaaagggttcctctatgccgttg
ttccatgaagccatgcagaagtggtactacaaagatccacaaggagaaattcagggtcca
ttcagtaatcaggagatggcagagtggttccaggctggatacttcacgatgtcgctgttg
gtgaagagagcctgtgatgagactttccagccacttggagacatcatgaaaatgtggggc
agggttcccttcactccaggcccagcaccgcttccgcatctgggcgagctggaccaagag
cgactgactagacaacaagagttggctctgatccaaatgcagcacctccagtatcagcat
cttttaatacaacaacagtatgcacagatgctggctcagcagcagaaggcagccctctca
tcccagcagcagcagcagctcgctattctcctgcaacagttccaggccctgaagatgaga
atatctgaacagaacatgatgccacctgttacaaggtctgtgtcagtgccggacactggc
tcaatatgggaacttcagtcagcttcacagcctacagtctgggaaggaagcagtgtctgg
gatctgcccattgatactgcagctcagggaccagctctagaacaacttcagcaactcgag
aaggccaaagctgcaaagctagagcaagagaggagagaagtggaaatgagggccaaacga
gaggaagaggagaggaaaaggcaggaggagcttcggaggcaacaagaagagctacttagg
aggcagcaggaagatgagaggaaacgacgggaagaagaagaactggcccgcaggaagcaa
gagatgacagtgagagctgagaggggtgaagcagtagacttaatctgcctggacttcagg
aaggcttttgatgtaatactgcataaaagactagtatataaggaagaggccctgaggcga
caacgagagcaggaaattgcactaaggcggcagcgggaggaagaggagaggcaacaacag
gaggaagcacttaggagattggaggagagaagaagagaggaggaggaaagacgccagcga
gaggagttaattcgtaaacaggaagaggaggctgccaaatgggcacgtgaagaggaggaa
gctcagcggcggctggaggagagccggctgcgcatggaggaggaggcggcccggcagcgg
ctggaggaggaggagaggaagcgcaaggagctggaactccagcgccagaaggagatcatg
aggcagaggcagcagcagcaggaggctttgcggcggctgcagcagcagcagcaacagcag
caacttgcacaaatgaagctcccttcatcttcaacatggggtcagcaatcaaattcagga
gcttgtcaatcccagaccacactgtcattggcagaaattcaaaagttagaagaagaacga
gaacggcagctccgagaagagcaaagacgtcagcagcgtgagctaatgaaggccctccag
caacagcagcagcaacagcagcaaaaattgtcaggctggggtaacgtcaccaaaccaaca
ggcaccaccaagtccctgctggagatacagcaggaggaggcaaggcagatgcagaaacag
cagcaacagcagcaccagcagccgaacagagtcagaaataccacgcactctaacctgcac
accagcattgggaattcagtgtggggctctctaaacactaatcccagcaaccagtgggca
tctgacctagtcagtagcatctggagcaatgctgataccaaaaactcaaacatgggtttc
tgggatgatgcagtgaaggaagtgggacctcgtaactcgaccaataaaaacaaaagcaat
gccagcctcagcaaatctgtaggtattacaagtagacaaaacaagaaggtagaagaagag
gaaaagctgttgaaattgttccagggggttaataaagcccaggatggattcactcagtgg
tgtgaacagatgcttcatgcactcaacacagccaacaacttagatgttcccacgtttgtt
tctttcctgaaggaagtggagtctccctatgaggtccatgactacatccgagcctacctt
ggagatactcctgaggccaaggagtttgccaagcagttcctcgagcgccgtgccaaacag
aaagccagtcagcagcggcaacagcagcaacagcaggattcagtgtgggggatgaaccac
agttcgctacattcagtctttcagactaatcagagcaacaaccagcagtccaactttgag
gctgtgcagagtgggaagaaaaagaagaaacagaaaatggttcgagcagatcccagcttg
ttagggttttcagtgaatgcttcatcagagcggctcaatatgggagaaatagagactttg
gaagactactga
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