Corvus cornix (hooded crow): 104683805
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Entry
104683805 CDS
T03546
Symbol
VTI1B
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
104683805 (VTI1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104683805 (VTI1B)
Membrane trafficking [BR:
ccw04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
104683805 (VTI1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
Laminin_II
WXG100
Snapin_Pallidin
Fusion_gly
DUF4407
DUF3958
KxDL
RSS_P20
Motif
Other DBs
NCBI-GeneID:
104683805
NCBI-ProteinID:
XP_039408934
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Position
5:33320655..33333230
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AA seq
232 aa
AA seq
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MAGRGSASSEHLERLHEIFRGLHGHLRGVPERLRGSAAEEKKKLVREFDEKQREANETLR
EMEEELKYAPVPFRNQMMSKIRAYRRDLSMFQREMRSTDLGLGRGNQGDTKYGIFATENE
QSTNLQSQRVLLLQGTDSLNRASESIERSHRIAAETDQIGTDIIEELGEQREQLERTKSR
LVNTSENLSKSRKILRSMSRRVTTNKLLLSIIIILELAILGGVVYFKFFRKK
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccgcgggtccgcgtcttcggagcatctggagcggctgcacgagatctttcgc
ggcctgcacggacacctgcggggcgtccccgagcggctgcggggtagcgcggccgaggag
aagaaaaaactggttcgagaatttgatgagaagcagcgtgaagctaatgagacgctgcgg
gagatggaggaagaactgaagtacgctcctgtgcctttccgcaaccaaatgatgagcaaa
atacgagcatacagaagagacctgtccatgttccagagagagatgagaagcacagatttg
ggattgggccgtggaaaccaaggcgatacaaaatatggaatcttcgccacagaaaatgaa
cagagtactaatctgcagtcacagagggtgctgcttctccagggcacagacagtctgaac
cgagccagcgagagcatcgagcgctcgcaccgaattgctgctgagactgatcagattggc
acagatataattgaagaacttggggagcagcgggagcagctggaacgcaccaagagcagg
ttggtgaatacaagtgagaacttgagcaaaagtcgcaagattctacgttccatgtccagg
agagtaaccactaataagttgttgctgtcaattatcatcatcctggaactggccatccta
ggaggtgtagtctacttcaagttctttcgcaagaaatga
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