Corvus cornix (hooded crow): 104683840
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Entry
104683840 CDS
T03546
Symbol
NEDD4
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4 isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04120
Ubiquitin mediated proteolysis
ccw04144
Endocytosis
ccw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104683840 (NEDD4)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104683840 (NEDD4)
09144 Cellular community - eukaryotes
04530 Tight junction
104683840 (NEDD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104683840 (NEDD4)
04121 Ubiquitin system [BR:
ccw04121
]
104683840 (NEDD4)
03029 Mitochondrial biogenesis [BR:
ccw03029
]
104683840 (NEDD4)
Enzymes [BR:
ccw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104683840 (NEDD4)
Membrane trafficking [BR:
ccw04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
104683840 (NEDD4)
Ubiquitin system [BR:
ccw04121
]
Ubiquitin ligases (E3)
HECT type E3
104683840 (NEDD4)
Mitochondrial biogenesis [BR:
ccw03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
104683840 (NEDD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
104683840
NCBI-ProteinID:
XP_010389167
LinkDB
All DBs
Position
10:complement(13202281..13253557)
Genome browser
AA seq
1309 aa
AA seq
DB search
MARRLRLHFATPRSNTDPLSETSEDVLDSNNCMYFQKSQNSAPSVTQVKLTPRQAAYAPV
VQQVINQEKSTTISSLQIKKSSSLHISLQSRKQSGCSGFGDAVAAGEDTSFIGIGSEGSC
GAGTVADHRSNDSLLSNAALGRGSLSSIAASDSGSFSSAGSDYGSCASTTSDGGSYSNSV
ISDSGSGTLWTNDSTFCSSVAYGDSSSRSTANKCNPSRSNSSQEMLYRSNTTFDQDALSV
RKKTKIPLRRCSSLVIFPRSPSSTPPASPVSSGQLPHRGTYQTSHKLIVSPSELAQKEDQ
TISKGFLSTAVNGLRLSKTVCSSSEVRDIRPLYLNASLQDKSQILNGPQQATCEEVPDGF
SCVSVHLTQRSFASSSEMVNGSCSPELNLNSGAKYPHLKLERSASACLPSKTDSEYQINI
NELGRPNAQMSKTHHILQRSVSLEGSRQKVSCCLSSLKYKCHSARTSQLHIQFKAGNEGK
TTGVRKRNGTSKREMSGTLWRPHKTRDDFLGQVDIPLYQLPTENPSMERPYTFKDFVLHP
RSHKSRVKGHLRLKMTYLPKTSGSEEETTEQAEELEPGWIILDQPEAASQPQQQQQESPP
LPAGWEERQDILGRTYYVNHEFRRTQWKRPTAQDSVAVADLGSVQLEAQHVFAHRRQISE
DTENADNRDSPESWEIITEDEATMYSSQNIQIPLSQSSCDIQTHLAEELSNRLTTSGSSA
TGQSTAYTSHSSRRGSLQTYRLEEQPAHPVLLPTSSGLPPGWEERQDEKGRSYYIDHNSR
TTTWIKPVVQTAVETSQVSAAQSISMGRQPQATSSDSSQQSSHQQPEMEQGFLPKGWEVR
HAPNGRPFFIDHNTKTTTWEDPRLKVSAHPKRKTSLDPVDLGPLPPGWEERTHTDGRIFF
INHNTKRTQWEDPRLQNVAITGPAVPYSRDYKRKYEFFRKKLKKQSDIPNRFEMKIHRTT
ILEDSYRRIIAVKRADFLKARLWIEFDGEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYS
ATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMLQKPITL
HDMESVDSEYYNSLRWILENDPTELDLRFIVDEELFGQTHQHELKSGGSEIVVTNKNKRD
YIHLVIQWRFVSRVQKQMTAFKEGFFELIPQDLIKIFDENELELLMCGLGDVDVADWKLH
TKYKNGYNINHQVIQWFWKAVLMMDSEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFT
VEQWGTPEKLPRAHTCFNRLDLPPYDSFEDLWDKLLLAIENTQGFDGVD
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggcacgacggttaagattgcattttgctaccccaagaagcaatacagatccattatca
gaaacctctgaagatgttttggatagtaataattgtatgtacttccaaaaatcgcagaat
tctgcacctagtgttacacaagtgaaactaactcctagacaagctgcttatgcacctgta
gtgcagcaagtaatcaatcaagagaaaagcacaactatttcttcactgcaaataaaaaag
agcagttcactgcacatttccctgcagtctaggaagcagagtggatgttctgggtttggt
gatgctgtggctgctggtgaagacacttcattcattggtattggtagcgaaggcagttgt
ggtgctggaactgtggctgatcatcgatctaatgatagccttctgagcaatgctgctctg
ggcagaggcagcctcagcagcattgcagcaagtgacagtggctcgttcagcagtgctggc
agtgactatggatcatgtgcaagtaccacaagtgatggaggttcatatagtaacagtgtc
atcagtgacagtggcagtggcactctttggacaaatgacagtactttctgtagtagtgtt
gcatatggtgactcttcatctagaagcacggcaaacaaatgtaatccctccaggagcaac
tcatctcaggaaatgctttatagaagtaatactacttttgaccaagatgctttgtcagtg
aggaagaaaactaaaattccattgcgacgttgttcatcactggttatttttcctaggagt
ccttccagtactcctccagcttctccagtaagctcaggtcaactaccacatagaggcacc
tatcaaacatctcataaattaattgtttctcctagtgagctggcacaaaaagaagatcaa
accatttccaagggattcctttcaacagcagtcaatggacttagactgtctaaaacagtt
tgctcttctagcgaagtcagagacatccgaccactttatttgaatgcatcattacaggac
aaaagtcaaattttgaatggtcctcagcaggcaacttgtgaagaagtacctgatggcttc
tcatgtgtttcagttcatcttacacaaagatcatttgcatcaagcagtgaaatggttaat
ggctcttgcagtccagagttaaatctgaactctggtgcaaaataccctcatttaaaactg
gaacgtagcgcatctgcatgtctgccctcaaaaacagattcagaatatcagattaatata
aatgagctaggaagaccaaatgcacagatgagcaaaactcaccatattttacaaagaagt
gtttccttggaaggatcacgtcaaaaagtttcttgctgcttatccagccttaaatacaag
tgtcatagtgcaaggacgtctcagttgcacatacagttcaaagccgggaatgaaggaaaa
acaactggtgttaggaaaagaaatggaacctctaaaagggaaatgtctggcactttgtgg
aggccccataagactcgagatgattttcttggacaagtggatattcctctttatcagtta
ccgacagaaaatccaagtatggagagaccatatacatttaaggattttgttcttcatcca
agaagccataaatcaagagttaaaggccaccttagattaaaaatgacttacttacctaaa
accagtggatccgaagaagaaaccacagaacaggctgaagaattagagcctgggtggatt
atattggaccaaccagaggctgctagccagccacaacagcagcagcaggaatctcctcca
ctgcctgcaggctgggaagaaagacaagacatccttggcaggacctactatgtcaatcat
gaattcagaagaacacagtggaaaagaccaactgcacaggacagtgtggcggtcgcagat
cttggcagtgtgcagctggaggcccagcacgtgttcgctcaccggcgacagatatcagag
gatacagaaaacgcagacaacagggattcccccgagagctgggaaattataactgaagac
gaggcaacaatgtacagcagtcagaacattcaaatacctctctcgcaaagtagttgtgat
atacagactcatcttgcagaagaattgagtaacagacttactacctctggaagttcagct
actggccagtcaacagcctacactagccattccagcagaagaggtagtctgcaaacatac
agacttgaagagcagcctgcacatccagtgttactgcctacttcatctggattaccccca
ggctgggaagaacgacaagatgaaaaaggaaggtcatattatatagatcacaattctaga
accactacctggataaaaccagttgtacagactgctgtggaaacaagtcaggtgtcagct
gcacaaagtatttctatgggaagacagccacaagcaacatcaagtgattcatcacaacag
tcttctcatcagcagcctgaaatggagcaaggatttctccctaagggctgggaagtccga
catgcacccaatgggagaccattctttattgaccacaataccaaaaccacaacatgggaa
gatccaagactgaaagtttctgctcatccgaagagaaagacttccctagacccagtagac
ctgggcccattaccaccagggtgggaagagagaactcatacagacggaagaatattcttc
ataaaccacaatacaaagagaacacagtgggaggatcctcgactgcagaatgtggcaata
actggtccagctgtgccttactccagggactataagcggaagtatgaattcttcagaaag
aaattgaagaaacagagtgatattccaaataggtttgaaatgaaaattcatcgcacaact
atccttgaagattcttatagaagaattatagctgtaaagagagcagatttccttaaagca
agactttggattgaatttgatggtgaaaaaggtttagactatggaggagtggccagggaa
tggttcttccttctctccaaagaaatgtttaatccttattatggattgtttgaatattca
gctacagataactatactctgcagatcaatccaaactctggactttgcaatgaggatcat
ctctcttatttcaagtttataggtcgtgtggctggaatggctgtttaccatggcaaactt
ttggatgccttttttattcgtcctttttacaagatgatgctccaaaaaccaataacacta
catgatatggagtctgtggatagtgaatattacaattctctgagatggattcttgaaaat
gatccaacagaactggacctcagattcattgttgatgaagagctttttggtcagacccat
caacatgaactgaaaagtggtggatcagaaatagttgtcaccaacaagaacaagagagac
tacattcatcttgtaattcagtggagatttgtgagcagagtacagaaacaaatgacagcc
tttaaagagggcttttttgaactaataccacaggatctgattaaaatttttgatgaaaat
gagctagagttattaatgtgtggattgggagatgtggacgtggctgattggaaactacac
acaaaatacaaaaacggctacaacataaaccaccaagtaatacaatggttctggaaggca
gtcttaatgatggactctgaaaagagaataagattacttcagtttgttactggcacatca
cgtgttcccatgaatgggtttgctgagctgtatggttcaaatggaccacagttgttcaca
gttgagcagtggggtacccctgaaaaactgccaagagctcatacctgctttaatcgcttg
gatttgcctccatatgactcgtttgaagatttatgggataaacttcttctagcgattgaa
aacactcagggttttgatggggttgattaa
DBGET
integrated database retrieval system
