Corvus cornix (hooded crow): 104683884
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Entry
104683884 CDS
T03546
Symbol
DENND4A
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104683884 (DENND4A)
Membrane trafficking [BR:
ccw04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
104683884 (DENND4A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_long
PPR_3
DUF2464
PPR
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
104683884
NCBI-ProteinID:
XP_010389244
LinkDB
All DBs
Position
10:complement(10768640..10817854)
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AA seq
1888 aa
AA seq
DB search
MEDKGARVADYFVVAGLTDISKPLEEEIHFNDACHKIAKPKEPITDVTVLNKSLGEEVPQ
GYKCIDVTPSGLSADLNNGSLVGPQIYLCYRRGRDKPPLTDLGVLYDGKERVKQDCEIIQ
TTPYGRPANISGSASSQRVYITYRRASENMTQNTLAVTDICIIIPSKGETPPHTFCKVDK
NLNNSMWGSAVYLCYKKSVAKTNTISYKAGLICRYPEEDYESFPLPESVPLFCLPMGATI
ECWPSNSKYPLPVFSTFVLTGASAEKVYGAAIQFYELYPEENLTEKQKSQLGLAAAVEGK
DTCRTVQTNKCICLLSHWPFFDAFKKFLTFLYRYSISGPHVLPIEKHISHFMHKVPFPSP
QRPRILVQLSPHDNLILSQPVSSPLPLSGGKFSTLLQNLGPENAVTLLVFAVTEHKILIH
SLRPSVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGIDSRYFDLYDPP
PDVSCVDLDTNTISQTGDKKAIAWKILPKKPCKNLMNTLNTLYQQLAELQQRPREDAFME
LAMNDYDFNSGKKLHLLDLEIQEAFLCFMASILKGYRSYLRPITEAPSETATDASSLFEL
QGFLKSRDRSHQKFYTLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKVDMDKTGETR
LIELDESYKSEHTVFITPPEIPHLPNGEEHPLQYSYNGFPVLKLELFERPEGFLTAPNNK
LSSKASSPNSPSPMFRRTKQEIKSAHKIAKKYSSIPQMWSRCLLRHCYGLWFICLPAYVK
VCHSKVRALRTAYDVLQKMHTKKIDPPDEVCYRVLMQLCGQYGQPVLAVRVLFEMQKAGI
DPNAITYGYYNKAVLESTWPSSNRGGYFLWMKIRNVVLGIAQFKKALKKLPASTAHTSVP
VIGGLSDTGNNTSLKEEAKQGKTCLRDIQEQKEDKRESDSSSLSEVESTKGSGDCLPKLN
YQNSRNDKATSSIVRLNGTVDSTVAEGSRESSVGLLFTSSFEDANEAEVIKNKSLRRRHK
SAVEADLREIPWESRNRNLSGDGLVGLMINRINQEANPGEIVEKLGADAKILSSALQKSI
RPKTLNIRTSSLGSKRESLEKESSDEDAAFDCSFTDKTESPVIFDLEDLDAEPETPTAVK
TSSEKSRRLQRKSSFPVKPVEKTDVETGFDPLSLLVAETEQQKEDEEEDDDRSVSTPSAR
RDLAEEIVMYMNNMSSPLSSRAPSIELQKPFDDRNANKRSPTIIQPCRRSSLPPNSPRPP
SLTKSKSYHAKNEERPRDRLWSSPAYSPNSPAKEQPQDTTSALTLVSSPSFNLDTLLTPK
FDVLKSSMFSAGKGVAEKASKWYSKFAMYAASAKDQNSDRASVSSLGALDSESTSLTDED
VCNDFESASPQENTTSEIKGISISKTSLESSASHDSSAKQFDQCGSLSKFPLPDKSELVS
SCSTSSTSVFQNYAMEVLISSCSRCRTCDCLVHDEEIMAGWTADDSNLNTTCPFCGNLFL
PFLSIEIRDLRRPGRYFLKSSPSTENMQFPSLFCNQSGKSCNTTGTVGLTTSLMSVQEDI
NSNSKSKQHDNVYARSIQIPSGRRQNTSGSECTSHPVARSISTFGPLEEDEKENQKISHI
IPTGSLPATLQGPTDSLGLEWRLPSPDPITVPYLSPLVVWKELESLLENEGDHAITVADF
VDHHPIVFWNLVWYFRRLDLPSNLPGLILSSEHCNKNSKIPRNCMSEDSKYVLIQMLWDN
MKLHQDPRQPLYILWNAQSQNRTLLFETQKYPMVQLLQKDDDSFNQELLRSMVKSIKMND
VYGPMSQILERLNKWPHIKRQRSLYREILFLSLVALGRDNIDIDAFDREYKMAYDRLTAN
QVKNTHNCDRPPSTGVMECRKIFGEPYL
NT seq
5667 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaaggggctcgtgttgctgactactttgttgtcgcaggattaacggatatc
tcaaaaccactggaggaggagatccacttcaacgatgcctgccataaaatcgccaaacca
aaagaacccatcacagatgtaacagtccttaataaatccctgggggaggaggttcctcag
ggctataaatgcatagatgtcactccctcgggcctgtccgcagatctcaataacggcagc
cttgtaggaccgcagatatacctttgttatcgccgaggaagggataagcctccacttact
gatttgggggttttatatgatgggaaagaaagagtgaagcaagactgtgaaatcattcag
accaccccgtatgggcggcctgccaacatcagtggcagtgcctcatcacagcgggtgtac
atcacctaccgcagggcctccgagaacatgacccagaacaccctggctgtcacagacatc
tgcatcatcataccgagcaaaggagagacccctccgcataccttctgcaaggtggacaag
aatcttaataatagtatgtggggctcagcagtatacttatgttataaaaagtctgtggca
aaaaccaacaccatatcatataaagctggtttaatatgcagatatcccgaagaagattat
gaatcattcccattaccagaatctgtgcctcttttttgtctccctatgggtgcaacaatt
gaatgttggccatctaacagtaaataccctctcccagttttttctacatttgtactaact
ggagcttctgcagaaaaggtatatggtgctgctattcagttttatgaactgtatcctgaa
gagaacctcacagagaaacaaaaatctcagctgggattagcagctgctgtcgagggaaaa
gacacgtgcagaacagtgcagacaaataaatgcatctgtctgctctctcactggcctttc
tttgatgctttcaagaaatttcttacctttctgtatcgttactccatttctgggccacat
gtccttcccattgagaaacacatttcccatttcatgcataaagtaccttttccatcccct
cagaggccaagaattctagttcagctgtctccacacgataacctgattcttagccagcct
gtgtcatcacccctcccactgagcggtggcaagttttctacactacttcagaatttagga
cctgaaaatgcagtaactctgctggtgtttgctgtgacggaacataaaatcctcatccac
tcattgcgaccttctgtcctcacgagtgtgacagaggcattggtctctatgatatttccc
ttccattggccttgcccatatattcctctctgtcccttggcactggcagatgtgttgagt
gccccgtgcccattcatagtgggaattgattccagatactttgatctctatgacccccca
cctgatgtcagctgtgttgacctggataccaacacaatttctcaaactggagacaagaaa
gctattgcatggaagatcttaccaaagaaaccttgtaaaaatctgatgaacactttaaat
actttgtatcagcaactggcagaattgcaacagcgaccaagagaagatgcattcatggaa
ttggcaatgaatgattatgattttaattctgggaagaaattgcatctcttagatttggag
atccaggaagcatttctctgtttcatggcttcaatcctaaaaggttacaggtcttatctc
aggccaataacagaggcaccctccgaaacagccacagatgcaagttctctgtttgaacta
caagggttcctcaaaagcagagaccgttcccatcagaagttctacaccctgatgaccaaa
actcagatgttcattcgcttcattgaggaatgttcttttgtcagtgacaaggatgccagc
cttgccttctttgatgactgtgtggataaagtagatatggacaaaactggggaaacacga
cttatagagctggatgagtcctacaagagtgagcacacagttttcataacaccacctgag
atccctcatctgccaaatggggaagagcaccctctacaatacagctataatggatttcca
gtattaaaactagaattgtttgaacggcctgaaggatttctcacagcaccaaataacaaa
ctgtcctcaaaagccagtagccccaacagcccatcaccaatgttcagaagaactaaacag
gaaattaaatctgcccacaaaattgctaagaagtactcctccatcccccagatgtggtcc
aggtgtttgctccgtcactgctacggcctttggttcatctgcctccctgcctatgtgaaa
gtctgccactccaaagtcagggctctgagaactgcctatgatgtgctacagaaaatgcac
accaaaaaaatagatccacctgatgaggtgtgctacagagtcctcatgcagctgtgtggg
cagtatgggcagcctgtgctggcagtcagggtgctctttgaaatgcagaaggctggcatt
gaccccaatgccatcacctatggctactacaacaaggctgttttggaaagcacctggcct
tcaagcaatcgaggtggctatttcctctggatgaaaatacgaaatgttgtcttaggaata
gcgcagtttaaaaaagcattgaaaaagctaccagcaagtactgcacatacgtctgttcct
gtgatagggggactttcagacactggcaataacacatcactcaaagaagaagccaagcaa
ggcaaaacttgtcttcgagacatccaagaacaaaaggaggacaagagagagagtgactcc
agttctctgtccgaagtggagagcacaaaagggagtggggactgcctgcctaaactgaat
taccagaactccaggaatgacaaagccacttccagcatcgtgcggctcaatggcactgtt
gacagtactgtggcagaagggagcagggagagttctgtaggattactgtttacatcatct
tttgaggatgccaatgaagcagaagttataaaaaataaatccttaagaaggagacataaa
agtgcagtggaagctgacttaagggagattccgtgggaaagcaggaaccggaatctgagt
ggagatggcttagtgggactcatgataaacagaatcaaccaggaagcaaaccctggagaa
attgttgaaaaactgggagctgatgccaaaattctatctagtgcattacagaaaagcata
cggccaaaaactcttaatatcagaacttcctctttagggtctaagagagaaagcctggag
aaagaatccagtgatgaagatgcagcttttgattgcagttttacagataaaacagaatct
cctgttatctttgatctggaagacctggatgcagaacctgaaacacctacagcagtgaaa
acttccagtgaaaaatcaagaaggttgcaaagaaagagcagctttccggtaaagccagtt
gaaaagacagatgttgaaactggatttgatccattgtctctgctggttgctgagacagaa
cagcagaaagaggatgaggaggaggatgatgatagaagtgtttctactccatctgcaaga
agagacttagctgaagagatagtcatgtacatgaacaacatgagcagccctttgtccagt
cgtgccccgagcattgagttgcaaaaaccctttgatgacagaaatgctaataaaaggagc
ccaaccattatccagccttgtaggaggtccagccttcccccaaactccccaaggccaccc
agtcttaccaaatccaagagctaccatgcaaaaaatgaagaaaggccaagggacaggctt
tggtcttccccagcttattccccaaacagcccagccaaggagcagccccaggacacaacc
agtgcattgacactcgtgtcatcaccatcgttcaacttggacacactgttaactcccaag
tttgatgttctgaaaagcagcatgttctctgctggaaaaggggttgcagagaaagcaagc
aagtggtactccaaatttgcaatgtatgctgcatctgcaaaggatcaaaattcagacaga
gcaagtgtttcatctcttggagctctggactcagaatctacttctctcactgatgaagat
gtctgcaatgattttgaaagtgcttctcctcaggagaacaccacatcagaaattaaggga
attagcatcagcaagacaagcctggaaagctcagcttcccatgatagctcagctaaacaa
tttgaccagtgtggttcactttccaagttccctttacctgacaaatcagagttggtatct
tcctgcagcacaagcagtaccagcgtgttccagaactatgccatggaggtcctcatctcg
agctgttctcggtgtcggacttgtgactgtttggttcatgatgaagaaatcatggcaggc
tggacagcagacgattcaaatctcaataccacgtgtcccttctgtggcaatttatttctg
ccttttttaagcatagaaatccgagatctgcggcggcctgggcggtattttctgaagtcc
agcccttctacagaaaatatgcagttcccatcccttttttgcaatcagagcgggaagtcc
tgtaacaccacaggcactgttggccttactacatccctgatgtctgtccaagaggatatc
aattcaaatagcaaatctaagcagcatgacaatgtttatgccagaagtatccagatcccc
tcaggacgaagacaaaatacttctgggtcagaatgtacaagtcatcctgtagcaaggagc
atcagtacttttggtcctttggaagaagatgagaaggaaaaccagaagatcagccatatc
attcctactggtagcctgcctgctactttgcaaggaccaacagattccttgggcctggaa
tggcgcttgcctagtcctgatcctattacagttccttacctcagtcctcttgtggtatgg
aaagagcttgaaagcttacttgaaaatgaaggggatcatgcaataacggtggcagacttt
gtagatcatcatcccattgtgttctggaatttggtgtggtatttcaggcgcttggacttg
cccagcaacttaccaggattaatactttcttctgagcactgcaataagaactccaagatt
ccacggaactgtatgtcagaggacagtaaatatgttcttattcagatgctatgggacaat
atgaaattgcatcaggatccgagacagcctctgtatattttgtggaatgctcagagtcaa
aatcgcactcttttgtttgagacccagaagtacccaatggtccagttattgcaaaaagat
gatgactcctttaaccaggagctcttgaggagtatggtgaaaagcattaagatgaatgat
gtgtatggaccaatgagtcagatattggagaggctcaacaagtggccacatattaaaaga
cagaggagcctttacagagaaatactgtttctttctcttgttgccctgggaagagataac
attgatatagatgcttttgacagagagtacaaaatggcctatgatcgtctcaccgctaat
caagtgaagaacactcataactgcgatagaccaccaagcactggagtgatggaatgcaga
aagatttttggagaaccatatctttaa
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integrated database retrieval system